Mastomys coucha (southern multimammate mouse): 116068021
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Entry
116068021 CDS
T07224
Symbol
Cdh16
Name
(RefSeq) cadherin-16 isoform X1
KO
K06810
cadherin 16, KSP-cadherin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116068021 (Cdh16)
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Major cadherins
116068021 (Cdh16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
116068021
NCBI-ProteinID:
XP_031192948
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MISAWLWLLCLPVTQVFTTEAQPAESLHTEVPENYGGNFPFYILKLPLPVGKDEGQIVLS
VDSSTEAQNTFAVDPGSGFLMTMRALDWEEKAEYQLQVTLESEDGRVLWGPQLVTVHVKD
ENDQVPQFSQAIYRAQLSQGTKPGVPFLFLEASDGDAPGTANSDLRFHILSQSPPQPLPD
MFQLDPQLGALALSPDGSTRLDHALEGTYQLLVQVKDMGDQPSGHQAIATVEISIVENSW
APLEPVHLAENLRVAYPHSIAQVHWSGGDVHYQLESQPPGPFDVDTEGRIHVTMELDREA
QAEYQLQVRAQNSHGEDYAEPLELQVVVMDENDNAPVCSPHDPTVSIPELSPPGTEVARL
SAEDLDAPGSPNSHIVYQLLSPETKDGAENKAFELDPTSGSVTLGTAPLHAGQNILLQVL
AVDLAGSEGGLSSTCEVAVMVTDINNHAPEFINPQIGPVILPEDVKPRALVATLLATDAD
LEPAFRLMDFAIEEGDPEGIFDLSWEPDSNHVQLRLRKNLSYEAAPDHKVVVVVRNVEEL
VGPGPGPAATATVTILVERVIPPLRLDQESYETSIPVSTPAGSLLLTIQPSDPMSRALRF
SLVNDSEGWLCIKEVSGEVHTAQSLQGAQPGDTYTVLVEAQDTDEPGLSTSATVVVHFLK
ASPVPALTLASGPSRHLCTPRQDYGVVVSGVSEDPDLANRIGPYSFALGPNPTVQRDWRL
QRLNDSHAYLTLALHWVEPGEYTVPVVVHHETHMWQLQVEVIVCRCNVEGQCMRKVGRMK
GMPTKLSAMGVLLGTLAAIGFILILVFTHLALARKDLDQTADSVPLKASV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgcctggctgtggctactttgcctccctgttactcaggttttcaccacggag
gcccagcctgcagaaagcctgcatacggaagtccctgaaaactatggtggaaatttccct
ttttacatactcaagctaccactacctgtggggaaggatgaaggccagattgtcctatca
gtagactcaagcacagaagctcaaaacacctttgctgtggatccaggttctggctttctg
atgacaatgagggccctggactgggaggaaaaggcagagtaccaactacaggtcaccttg
gagtctgaggacggacgtgtcttgtggggtccacagcttgtgactgtgcatgtgaaagat
gagaatgaccaggtaccccaattctcccaagccatctacagagctcagctgagccagggc
accaagcctggagttcccttcctcttccttgaggcttctgatggggatgcaccaggcaca
gctaactcggaccttcgcttccacattctgagccagtccccacctcagcctttaccagat
atgttccagctggaccctcaactaggggctctggcccttagccctgatggaagcaccagg
ctagaccatgcccttgaagggacttaccagctattggtacaggtcaaggacatgggtgac
cagccatcaggccaccaggctatcgcgaccgtggagatctccatagtagagaacagctgg
gcacccctagagcctgttcacctggcagagaatctcagagttgcatacccacacagcatt
gcccaggtgcactggagtggaggagatgtgcattatcagctggagagccagcctccagga
cctttcgatgtggatacagaggggaggatccatgtaaccatggagctggaccgagaggcc
caggctgagtaccagctccaagtccgagctcagaactcccatggtgaggactacgcagaa
cccctggagttgcaggtggtggtgatggatgaaaacgacaatgcacctgtctgctctcca
catgacccaacggtcagcatccctgagctcagccccccaggaactgaagtagccaggctc
tcagcagaggatttggatgcccccggatcacccaattcccacattgtgtatcagttgttg
agccctgagactaaggatggggctgaaaacaaagccttcgagttagatccgacctcaggc
agtgtaacgctgggaactgccccactccacgctggccagaatatcctacttcaggtgctg
gctgttgacttagcaggatcagagggtggcctcagcagcacatgtgaggtggcagtcatg
gtcacagatatcaacaaccacgcccccgagtttatcaatccccagattgggcctgtaatt
cttcctgaggatgtaaagcccagggctctggtggccacactcttggccactgatgccgac
cttgagcctgccttccgccttatggactttgccattgaagaaggagacccagaagggatc
tttgacctgtcctgggagccagactctaaccatgtccaactcagactccggaagaacctc
agctacgaggcagctcctgatcacaaagtggtggtggtagtgcggaatgtagaggaactg
gtgggtccgggcccgggccctgcagccacggccacggtgactatactggtggagagggtg
ataccacccctcaggttggaccaggagagctatgagaccagcatcccagtcagcacccca
gctggatccctcctactgaccattcagccctcagaccccatgagcagagccctcaggttc
tccctggtcaatgactcagagggctggctctgcatcaaggaggtatctggggaggtacac
acagcccagtccctgcagggtgcccagcctggagacacatacacagtgcttgtggaggcc
caagacacagacgagccaggtctgagcacttctgccaccgttgtggtccacttcctgaag
gcctctcctgtcccagcattgactctagcctctgggcccagccgacacctctgtacaccc
cgccaagactacggtgtggttgtgagcggagtcagtgaggaccctgacctggccaacagg
atagggccttacagctttgctcttggtcccaaccccactgtgcagcgggattggagactc
cagcgtctcaatgattctcatgcctacctcaccttggcattgcattgggtagagcctggt
gaatacacggtacctgtggttgtccaccatgagacccatatgtggcaactccaggtcgaa
gtgattgtgtgtcgctgcaatgtggagggtcaatgcatgcgcaaggtgggtcgcatgaag
ggaatgcccacgaagctgtcagcgatgggtgtcctcttgggcaccctggcagcgataggc
ttcattctcattcttgtcttcacgcacctggccctggcaaggaaggacctggatcagaca
gcagacagtgttcccctcaaagcatcagtgtga
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