Mastomys coucha (southern multimammate mouse): 116068122
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Entry
116068122 CDS
T07224
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03030
DNA replication
mcoc03410
Base excision repair
mcoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116068122 (Pole)
03410 Base excision repair
116068122 (Pole)
03420 Nucleotide excision repair
116068122 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoc03032
]
116068122 (Pole)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116068122 (Pole)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116068122 (Pole)
DNA replication proteins [BR:
mcoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
116068122 (Pole)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
116068122 (Pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Pam3_Gp34
Motif
Other DBs
NCBI-GeneID:
116068122
NCBI-ProteinID:
XP_031193176
LinkDB
All DBs
Position
Unknown
AA seq
2282 aa
AA seq
DB search
MVLRNSGRRHPEPGADSEGSRDDGPSSSISALKRLERSQWTDKMDLRFGFERLKEPGERT
GWLINMHPTEVLDEDKRLVSAVDYYFIQDDGNRFKVALPYKPYFYIAARKGCDREVSSFL
SKKFQGKIAKLENVPKEDLDLPNHLVGLKRSYIKLSFHTVEDLVKVRKEISPAVKKNREQ
DRASDEYTTMLSSILQGGSIITDEEETSKKIADQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRFRGNAFPVEISRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAIHGLSMYQEIGFQKDSQGEYKSPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPVEQATNFQEVC
EQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPG
ATCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHMTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEVGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKPKLTISYPGAMLNIM
VKEGFTNHQYQELTEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFVLEGKRQIVMAQA
SENSLSLCTPDMEDIGLTKPHHSTVPVATKRKRVLESQKESQDIALTVPWQEVLGQPPSL
GTTQEEWLVWLQFHKRKWQLQAQQRLARRKKQRLESTEDMPRLGAIREGPATGLGSFLRR
TARSIMDLPWQIIQISETRQAGLFRLWAIIGNDLHCIKLSIPRIFYVNQRVAKAEDGPSY
RKVNRALPRSNIVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQL
GCVCVVNKQLARHLSGWEAETFALEHLEMRSLAQFSYLEPGSVRHIYLYHHTQGHKALFG
VFIPSQRRASVFVLDTVRSNQMPGLSALYAAEHSLLLDRVDAKLLPPPKHTFEVRAETNL
KTICRAIQRFLLAYKEERRGPTLIAVQSSWELCRLTSEIPVLEEFPLVPVRVADKISYAV
LDWQRHGARRMIRHYLNLDICLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINNSGCYSTVCMELDIQNLAVNTILQ
SHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQAASALASYDETALCSSTFRILKSMVVG
WVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEFKRLGS
SVIYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPSN
YGGIKGKVPSRIHCGQVKEQDSQEREETEDEEDKEKDEEEEDMGESEVEDLLENNWNILQ
FLPQAASCQSYFLMIVSAYIVAVYQSMKDELRHSAPGSTPVKRKGASQFSQEAEGAAGAL
PGMVTFSQDYVANELTQSFFTITQKIQKKVTGSRNTTEPSEMFPVLPGSHLLLNNPALEF
IKYVCKVLSLDTNITKQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSCNFC
RDLDLCKDSSFSQDGAILPQWLCSNCQAPYDSSAIESALVEALQRKLMAFTLQDLVCLKC
RGMKETHMPVYCSCAGDFVLTIHTEVFMEQIRIFQNIAKYYSMSYLQETIEWLLQTSPAS
NC
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgaggaacagtggacggaggcaccctgagccgggcgcggacagtgaaggcagc
cgggatgatggtccctcttcctcaatctcagcactcaagcgtctggaacggagccaatgg
acagataagatggacttacggtttggttttgaaaggctgaaagagcctggagaaaggact
ggctggcttatcaacatgcaccctactgaggtattagatgaagacaagcgcttagtcagt
gcagtggattactacttcattcaagatgatggaaacagatttaaggtggccttgccctat
aagccatatttctacattgcagctagaaagggctgtgatcgagaagtttcatcttttcta
tccaagaagtttcagggtaaaattgcaaagttagagaatgtgcccaaagaagatctggat
ttgccaaatcacttggtgggcttgaagcggagttacatcaagctgtccttccacactgtg
gaagaccttgtcaaagtgagaaaggagatctcccctgctgtgaagaagaaccgagagcag
gaccgcgctagtgacgagtatacaacaatgctctccagtattctgcaaggtggcagtata
attactgatgaggaggagacctctaagaagatagctgaccaactggacaacatagtggac
atgcgggagtatgatgttccctaccacattcgcctctccattgacctcaaaatccatgtg
gcccactggtacaatgttagatttcgaggaaatgcttttcctgtggaaatttcccggaga
gatgatcttgttgaacgacctgaccctgtggttttggcatttgacatcgagacaaccaaa
ctgcctctgaaattccctgacgccgagacagatcagatcatgatgatttcctatatgatt
gatggccagggttacctcatcaccaacagggagattgtttcagaagatattgaagatttt
gagttcactccaaagccagaatatgaagggcctttttgtgtcttcaatgaacccgatgag
gtccatctgatccagagatggtttgaacatgtccaggagaccaaacctaccattatggtc
acctacaatggggatttttttgactggccatttgtggaggctagggcagcaattcatggc
ctcagcatgtaccaggaaataggcttccagaaggatagccagggagaatataagtcacca
cagtgcatccacatggactgcctcaggtgggtgaagagggacagttaccttcctgtgggc
agtcataatctcaaggcagctgccaaggccaaacttggctatgaccctgtagagctggac
cctgaggacatgtgtcgaatggccactgaacagccccagactctggccacttactcagtg
tcagatgctgttgctacttactacctgtacatgaaatacgtccatcccttcatattcgcc
ctgtgcaccattattcccatggaacctgatgaggtgctgcggaagggctcaggaacactg
tgtgaagccttgctgatggtgcaagctttccatgccaacattgtcttccccaataaacaa
gagcaggagttcaacaagctgacagatgatggccacgtgctggatgcggagacctacgtt
gggggccatgtggaggcactagagtctggtgtcttccgaagtgatatcccctgccgcttt
aggatgaatcctgcagcctttgatttcctgctgcaacgagttgagaagactatgcgccat
gccattgaagaagaagagaaggtgcctgtggaacaagccaccaactttcaagaggtgtgt
gaacagattaagaccaagctcacctctctaaaagatgttcctaacagaattgaatgtcct
ctaatctaccatctagatgtgggggccatgtatcctaacataatccttaccaaccgcctg
cagccttctgccatagtggacgaggctacctgtgctgcctgtgatttcaataagcctgga
gcaacctgtcagaggaagatggcctggcaatggaggggagaattcatgccagccagtcgc
agtgaataccatcgaattcagcatcagctggagtcagagaagttcccccctttattccca
gaggggccagcacgggcctttcatgagctgtcccgtgaagaacaggctaaatacgagaag
cggagactggcagattattgccggaaagcctataagaagatccatatgaccaaggtagaa
gaacgtctaactaccatctgccagcgagaaaactcattttatgtggacacagtgcgggcc
ttcagagacaggcgctatgaattcaaaggactgcacaaggtgtggaagaagaagctctct
gcagctgtagaggtgggtgatgcatcagaggtgaagcgctgcaagaacatggagatcctt
tatgattcgctgcagctggctcacaagtgcatcctgaactccttctacggctatgtcatg
cgcaaaggagctcgctggtattccatggagatggctggtattgtctgctttacaggagcc
aacatcatcacccaagcaagagagctgattgagcagattgggaggcctttagaactggat
acagacggaatatggtgtgtcctgcccaatagctttcctgaaaattttgttatcaagaca
acaaatgtgaagaaacctaaactgaccatctcctaccctggtgccatgttgaatatcatg
gtcaaggaaggctttaccaaccaccagtaccaggaactaacagagccttcgtctctcacc
tatgtcacccgctctgagaacagcatcttttttgaagtcgatggaccgtaccttgctatg
atccttccagcctccaaggaagaaggcaagaagctgaagaagagatatgctgtattcaat
gaagatggttccttggctgaactgaaaggttttgaggtgaaacgccgaggagagttgcaa
ctgattaaaatcttccagtcctcagtttttgaggccttcctcaagggcagcacactggaa
gaggtgtatggctctgtggccaaagtggctgactactggctagatgtgctctacagcaag
gctgctaatatgcccgattctgaattgtttgagctgatttctgagaaccgatccatgtct
cggaagctagaagattatggggagcagaagtctacatccatcagcacagcaaagcgcctc
gctgagttcctgggagaccagatggtcaaagatgctggactgagctgccgctatatcatc
tcccgaaagccagaggggtctcctgtcactgagagggccattccacttgccattttccaa
gcagagcctacagtgaggaaacattttctccggaaatggctaaagagttcatcacttcaa
gactttgatattcggacaattctggactgggactactacatagagaggctggggagtgcc
atccagaaaatcatcaccatccctgcagctctgcaacaggtgaagaacccagttccacgc
gtcaaacatccagactggctgcacaaaaaactactagagaagaatgatgtctacaagcag
aagaagatcagtgagctctttgtgcttgaaggaaagagacagattgtaatggcccaggct
tcagaaaacagtcttagtctctgcactccagatatggaggacattggactcacaaagcca
caccactctacagtcccagttgctactaagaggaagcgagtcttggagagccaaaaggag
tctcaggatattgcactaactgtgccctggcaagaggtcttagggcagcctccctccctt
ggaaccacacaggaagagtggttggtctggctccagttccacaagagaaagtggcagctg
caggcccaacagcgcctggcccggaggaagaagcaacgcttagagtcaacagaagacatg
ccacggcttggggctatccgagagggacctgccacaggactggggagctttttgcgacgg
accgcccgcagcatcatggaccttccatggcagataatacagatcagtgagaccaggcag
gctggtctgttccgtctgtgggctatcatcggcaatgacttgcactgcatcaagctgagt
atccctcgaatattctatgtaaaccagcgggtagccaaagcagaggatgggccttcatat
cgaaaggtgaatcgggctcttcctcgttccaacattgtctacaatctctatgagtattca
gtaccagaggacatgtaccaagaacacatcaacgagatcaacactgagctgtcagcacca
gacattgagggcgtttatgagacgcaggtcccattgttattccgggcccttgtacagctg
ggctgtgtgtgtgtggtcaacaaacagctggcaaggcacctttcgggctgggaagctgaa
acctttgccctcgagcaccttgaaatgcgttctctggcccagttcagctacttggaacca
ggaagtgtccgccatatctacctgtaccatcacacacagggccacaaggcactctttggg
gtctttatcccctcacagcgaagagcatctgtgttcgtgttggatactgtacgaagcaac
caaatgccagggctcagtgccctgtatgcagcagaacacagcctgctgctggacagggtg
gatgccaagctcctgcctcccccaaaacacacctttgaagttcgtgctgaaaccaacctg
aagaccatctgcagagccatccagcgcttcctgcttgcctacaaggaagagcgtcggggg
cccacgctcatcgctgtccagtctagctgggagctgtgtaggctgaccagtgagattcca
gtcttagaagagttcccactagtgcctgtccgagtggccgacaagatcagctatgcagtc
ctagactggcagcgccatggagctcgacgaatgatccggcactaccttaatttagacatt
tgcctttcacaggcctttgagatgagcaggtacttccacatccccgttggaaacttgcca
gaagacatctccacctttggctctgacctcttttttgcacgccacctccagcgccataac
cacctgctttggctgtcccctacctctcggcctgacctgggtgggaaggaagctgatgac
aatcgccttgtcatggagtttgatgaccgagctactgtggagatcaataattctggctgt
tactctactgtgtgcatggagctggacattcaaaatctggcagtcaacaccatcctccag
tcccaccatgtcaatgacatggagggggctggcagcatgggcatcagcttcgatgtgatc
cagcaggcctccctagaggacatggttacaggcaatcaagctgccagtgccctcgccagc
tacgatgagacagctctctgctctagtaccttcaggatcctgaagagcatggtggttggc
tgggtaaaggaaatcacacagtaccacaacatctatgctgacaaccaggtaatgcacttc
taccgctggctccagtcaccttgctctctgctccacgacccagcccttcaccggacactg
cacaatatgatgaagaagctcttcctgcagctcattgctgagttcaagcgcctggggtca
tcagtcatctatgccaatttcaatcgcatcatcctctgtacaaagaagcgccgaatagag
gatgcccttgcctatgtggaatatattaccaacagcatccattctaaagagatctttcat
tccctgacaatctctttctctcgatgctgggaattccttctctggatggatccatccaac
tacggaggaatcaaaggaaaagttccatctagaattcactgtggacaggtaaaagagcaa
gactcccaggaaagggaggaaactgaggatgaggaggataaggaaaaggacgaggaggaa
gaggacatgggggaatctgaggttgaagacttactggagaacaattggaacattctacag
ttcttgccacaggcagcctcttgccagagctacttcctcatgattgtttcagcatacatc
gtagctgtgtaccaaagcatgaaggatgagttgagacacagtgccccaggcagtacccct
gtgaagaggaagggggccagccagttctcccaggaggctgaaggggcagctggagctctt
cctggaatggtcaccttttctcaagattatgtggcaaatgagctcactcagagcttcttc
accattactcagaaaattcagaagaaagtcacaggttctcggaacaccactgagccctca
gagatgttccctgtcctccctggttcacacttgctgctcaataatcctgctctggaattc
atcaaatatgtgtgcaaggtactgtctctggatacaaacatcacaaaacaggtaaataag
ctgaacagagacctacttcgcctggtagatgttggtgaattctctgaggaggcccagttc
agagacccctgccactcctacgtgctccctgaggtaatctgccatagctgtaatttctgc
agagacctggacctgtgcaaagattcatctttctctcaggatggagccatcctgcctcag
tggctctgctccaattgtcaagccccctatgactcatctgccattgagtcagccttggtg
gaagccctgcagaggaaactgatggccttcacacttcaggacctggtatgcctcaagtgt
cgtggtatgaaagagacccacatgcctgtgtactgcagctgcgcaggggactttgttctc
accatccacactgaggtattcatggaacagataagaatcttccagaacattgccaagtac
tacagcatgtcatatctccaggagactatagaatggctgctacagacaagccctgcatcc
aactgttag
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integrated database retrieval system
