Mastomys coucha (southern multimammate mouse): 116068144
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Entry
116068144 CDS
T07224
Symbol
Ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116068144 (Ttc28)
Cilium and associated proteins [BR:
mcoc03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
116068144 (Ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_16
TPR_17
TPR_19
TPR_9
TPR_NPHP3
TPR_6
TPR_11
ANAPC5
OrgC
T4SS
Motif
Other DBs
NCBI-GeneID:
116068144
NCBI-ProteinID:
XP_031193241
LinkDB
All DBs
Position
Unknown
AA seq
2448 aa
AA seq
DB search
MEQPPPLAPEPASARSRRRREPESPPAPIPLFGAKVQRSPGEPALSKAEFVEKVRQSNQA
CHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAHMKTQQYHKALDDAIKARLLNPKWPKA
YFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQLQK
MKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLG
NTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLK
DREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYIAMG
DFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQELM
EKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKG
DYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVN
DRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRG
EYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLH
DKLSQAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQSLDNSQAKFRALGNLGDIFICKK
DVNGAIKFYEQQLGLSHHVKDRRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQELS
DLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYGNMGITKMNMN
VMEDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQ
SLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHELGEASNKAQAYGELGSLHS
QLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAE
ETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHH
ALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASALFE
TIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQ
TGQQDSDPYSPITIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLGDN
SVESSSDFQAGNSAALPVATSSTLEQHIASVREALGVESYYSRACASSETESEAGDIMEQ
QLEEMNKQLNSVTDPTGFLRMVRHNNLLHRSCQSMTSLFSGTVSPSKDGTSSLPRRQNSL
VKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLVPFALLKGSASNEYLYE
RFTLIAVPAVRSLGPHSKCHLRKTPPTYSSSTAMAAVIGNPKLPSAVMDRWLWGPMPSAE
EEAYMVSELLGCQPLVGSMATKERVMSALTQAECVHFATHVSWKLSALVLTPNTEGNPAS
SKSSFGHPYTIPESLRVQDDASDVESISDCPPLRELLLTAADLLDLRLSVKLVVLSSSQE
ANSRVTADGLVALTRAFLAAGAQCVLVALWPVPVAASKMFVHAFYSSLLNGLKASASLGE
AMKAVQSSKAFSHPSNWAGFTLIGNDVKLNSPSSLIGQALTEILQHPERARDALRVLLHL
VEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPAASGLPAAVFFPTS
DPGDRLQQCSSTLQALLGLPNPALQALCKLITASETGEQLISRAVKNMVGMLHQVLVQLQ
ACEKEQDFASAPIPVSLSVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQASRRTTH
FALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNALPLGYQHPPFSPTGADSIASD
AISVYSLSSIASSMSFVSKPEGGLEGGGTRGRQDYDRSKGTHPQRATLPRRQMSPQARHG
ASKEEEEYEGFSIISMEPLATYQGEGKACFSPDPKQPCVKAPGGVRLSVSSKGSVSTPNS
PVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESAPKLDPQELAQRILE
ETKSHLLAVERLQRSGGPASPDREDSVTVPSNTTVFRASETSAFSKPILSHQRSQLSPLT
VKPQPPARSSSLPKVSSPASSEVSGKDGLSPSGSSHPSPGRNTPVSPADPPLFRLKYPSS
PYSAHISKSPRNTSPACSAPSPALSYSSAGSARSSPADAPDEKVQAVHSLKMLWQSTPQP
PRGPRKICRGAPGTLTSKRDVLSLLNLSPRHGKEEGGVDRLELKELSVQQHDEVPPKVPT
NGHWCTDTATLTTAGGRSTTAATRPLRLPLANGYKFLSPGRLFPSSKC
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccgccgcctctggcgcccgagccggcctcggcgcggagccgcaggcggcgg
gagccggaatctccgccggcgccgattcctctctttggtgctaaggtccagagaagtcct
ggtgagccagccctgagcaaagctgaatttgttgagaaagttcgtcagagtaaccaggcc
tgtcatgatggagacttccacacagctattgttttgtacaatgaagccctggcagttgac
cctcagaactgcattttgtatagcaacagatctgcagcccacatgaaaacccagcagtac
cacaaagcgctggatgatgcaatcaaggcccggctcctcaaccccaagtggccaaaggca
tacttccgacagggtgttgccctccagtaccttggacgtcacgcggacgccctggcagcc
tttgcatctgggctggctcaagaccccaagagtctccagctcctggtggggatggtggaa
gctgccatgaagtctcccatgagagacaccctggagcccacttaccagcagcttcagaaa
atgaaactagacaagagtccctttgtggtcgtgtctgtggttgggcaggaactcctgaca
gctggccaccacggggcctccgtggttgtcttagaagctgctctgaagattggcacttgc
agcctcaaactgagaggctctgtcttctccgccctgagcagtgcacactggtctcttggc
aacacagagaagagcactgggtacatgcagcaagacttggacgtagccaagaccttaggt
gaccagacaggagaatgccgagctcacgggaatctaggctctgcattcttttccaagggg
aattaccgagaggccctcacaaaccacaggcatcagctggtgctcgccatgaagctcaag
gatcgggaggcagcgtcgtcagcgctgagcagtctgggtcacgtgtacacagccatcgga
gactaccccaacgcgctggccagtcacaagcagtgcgtcctcctcgccaagcagtccaaa
gatgacctttccgaagcccgagaacttgggaacatgggagccgtgtacatcgccatgggt
gacttcgagaacgctgtgcagtgccacgaacagcacctgcggatagccaaggacctggga
agcaagcgcgaggaggcccgtgcctacagcaacctgggcagtgcctaccactaccggagg
aactttgacaaggccatgtcctaccacaactgtgtgctggagctggcacaggagctgatg
gagaagcccattgagatgcgagcctacgctggcttgggccatgcagccaggtgcatgcag
gacctggagagggcaaaacagtaccatgagcagcagctgggtatcgcggaggacctcaag
gaccgggcggcggagggccgcgcatcctccaatctggggatcatccaccagatgaaaggc
gattatgacacagccctaaagctccacaagacccacttgtgcatcgcccaagagttgagc
gactacgcggcccaaggccgtgcctatggaaatatgggcaatgcctacaatgccctgggc
atgtacgaccaggccgtcaagtaccaccgtcaagagctgcagatctccatggaagtgaat
gaccgtgcctctcaggcttcgactcatgggaacctggctgtcgcctaccaggccctggga
gcccatgaccgggcactgcagcactaccagaaccacctgaacattgcccgggagctgaga
gacatccagagcgaggcccgggctctcagcaacctggggaacttccactgctccagggga
gagtatgtgcaggccgcaccctactacgagcagtacctccgcctcgctcccgacctccag
gacatggagggggaaggaaaggtctgccacaaccttggctatgcccactactgcctcggg
aactaccaggaggctgtgaagtactatgagcaggatctggctctggccaaagaccttcat
gacaaactgagccaagcaaaagcctattgcaacttgggcctggccttcaaagctctgctg
aattttgctaaagccgaggagtgtcagaagtaccttctgtccctagcccagtccctggat
aattcccaggcaaagtttcgagccctagggaacctgggtgatatattcatctgcaaaaag
gatgtaaatggtgcgataaagttctacgagcaacagctgggcctatctcaccatgtgaaa
gacagaaggctggaggccagtgcctacgcggccctgggtaccgcgtaccgaatggtccag
aagtacgacaaggccttaggctatcacacgcaggagctggaggtctaccaggaactgagt
gacctgccaggggagtgccgggctcacgggcacctggcggccgtctacatggcccttgga
aaatatacaatggcattcaagtgttaccaggagcagctggagctggggcggaagctgaag
gagccgagtctggaagcccaggtgtacggcaacatgggcatcacaaagatgaacatgaat
gtgatggaggatgccattggctactttgagcagcagctggccatgctgcagcagctcagt
gggaacgagtctgtgctggacaggggtcgggcctacggcaacctgggggattgctatgag
gccctaggggactatgaggaagccatcaagtactacgagcagtacctgtctgtcgcccag
agtctgaaccgcatgcaagaccaagccaaggcttaccggggtctaggaaacggacacagg
gcgacggggagcttgcagcaggcccttgtgtgcttcgagaagaggcttgtggtggcccat
gagcttggggaggcctccaataaagctcaggcctacggagagctgggaagtctccacagc
caattagggaactatgagcaagccatctcctgccttgaacgccagctgaacattgccaga
gacatgaaggaccgagctttggaaagtgatgcagcctgcggcctggggggtgtctaccag
cagatgggagagtacgacacagccctgcagtaccaccagctcgatctgcagattgcagag
gagaccgacaaccccacatgccagggccgggcctacgggaacctgggcctcacctatgaa
tccctgggcactttcgagagggctgtggtctatcaggagcagcacctgagcatcgcagcg
cagatgaacgacttggtggccaagactgtatcttacagcagcctgggaaggactcaccac
gccctccagaactattcacaggcagtcatgtacttacaggaaggtttaaggttagctgag
caactgggtcgaagagaagatgaagcaaagatccgccatggtcttggtctctccctttgg
gcaagtggaaacctggaggaggctcagcaccagctttacagggcatcagccttgtttgaa
acgatccggcacgaggcacagctgagcacagactacaagctctctctgttcgacctgcag
acttcttcctaccaggccttgcagcgggtgctcgtcagcctaggtcaccatgacgaagcc
ctggcagtggcagaaaggggccggacgagagcgtttgctgacctgctggtggaaagacag
acaggacaacaggactcagacccctactcgcccatcaccatcgatcagatcttagagatg
gttaatgcgcagcggggactagtgctgtactactccctggccgcaggctatctctacagc
tggctgcttgctcccggagcaggaatcctgaagtttcacgaacattacttgggtgataat
tcggtggaaagttccagtgacttccaagccggcaacagtgcagccctccccgtagccacc
agctctacattggagcagcacatcgccagtgtccgggaggccctgggggtggagtcttac
tactccagggcctgtgccagcagtgagacagaaagcgaagccggagacatcatggaacag
cagttggaggagatgaacaagcagcttaactcggtaaccgaccccacaggcttcctgagg
atggtgcgccacaacaacctcctacacaggagctgccagagcatgacaagcttattcagt
ggtacggtgtcacccagcaaggatgggacctcctctctacccaggaggcagaactcactg
gtcaagcccccactccgcgccctgtacgatctgctcatcgcgcccatggaagggggcctg
atgcactccagcggccctgtgggccggcaccggcagctggtcctggttctggagggggag
ctctaccttgtcccctttgctctcctgaagggcagcgcgtccaatgagtacctgtatgaa
cgctttaccctcattgctgtgcccgccgtccgctcccttggtccgcactccaagtgtcac
ctgaggaagaccccacccacatattccagctccacagccatggcagctgtcataggcaac
cctaagctcccgtcagcagtgatggacaggtggctgtggggcccgatgccctcggcagaa
gaggaggcatacatggtgtcagaacttctgggctgtcagcccctggtgggcagtatggcc
accaaggagagggtcatgagtgccctgacccaggctgagtgtgtccactttgctacccat
gtctcttggaaactatcagccttagtcctcacacccaacacagagggcaaccctgccagc
agcaagagctccttcggccacccctacacaatccccgagtcgctgcgggtgcaggatgac
gcgagtgacgtagaaagcatctcagactgcccaccactgcgggagctgctcctcacagcg
gccgacctcctggacctgcggctgtctgtgaagctggtggtgctcagttcttcccaggag
gccaacagccgagtcacagcagacggcttggtggcgctgacacgagccttcctggctgct
ggtgcacagtgtgtgctcgtggctctgtggccggtgccggtcgcggcctctaagatgttc
gttcatgccttctactcatccctgctgaatggcctgaaggccagcgcctccctaggcgag
gccatgaaggcagtgcagagcagcaaggccttctcgcatccttccaactgggcaggcttc
acgcttattgggaatgatgtcaagctgaacagcccctcgtcgctcatcggccaagcgctc
acggagatcctgcagcacccagagcgggcacgggacgccctgcgtgtgctgctgcacctg
gtggagaagtccctgcagcggatccagaatggacagcgcaatgccatgtacacatctcag
cagagcgtagagaataaagtgggcggcatccctggatggcaggccctcctcaccgcagtg
ggtttccggctggaccctgctgccagtggactgccagcagccgtcttcttcccaacctca
gacccaggcgacaggctgcagcaatgcagtagcactctccaggccctgctgggtctgccc
aacccagccctccaagcactgtgcaagctcatcacggcctcagagacaggcgagcagctc
atcagccgggctgttaaaaatatggtgggaatgctccatcaggtgctggttcagcttcag
gcctgcgagaaggaacaggactttgcctcagctcccattccagtctccctcagtgttcag
ctgtggcggctcccagggtgccatgagttcctggcagctctcgggtttgacctttgtgaa
gtgggccaagaggaagtgatcctgaaaaccggtaaacaggctagtcggcgcaccacccac
tttgctctccagtccctgctgtcactcttcgattccacggagctccccaagcgtctcagc
ctggacagctcctcctccctggagtccctggcgtcagcacagtctgtgtccaacgctctg
cccttgggctaccagcaccctcctttctcacccacgggggcagacagcattgcctccgac
gccatctctgtgtacagtctcagctcaattgcctcctccatgagttttgtctccaagccc
gaggggggattggaaggcggaggtactcgaggacgacaggactatgataggtccaagggc
acccacccacaacgagccaccctgccacggcgccagatgtccccccaggccagacatggg
gccagcaaggaagaagaagagtatgaggggttctccatcatcagcatggagcctctggca
acctaccaaggcgaggggaaggcatgcttctcccctgaccccaaacagccctgtgtcaag
gcaccaggtggtgtgaggctctcggtcagctccaagggcagtgtcagcacccccaactcc
cccgtgaagatgaccctgatccccagcccaaactcaccctttcagaaagtgggaaaactg
gcaagctcagacacaggtgagtcggaccagtccagcacagagactgacagcactgtgaag
tcccaggaggagagtgccccaaagctagatccccaggagctggcccagaggatcctggag
gagaccaaaagccacctcctggccgtagagcgccttcagaggagtggaggcccagccagc
cctgaccgagaagacagcgtgacagtacccagcaacaccacagttttcagggcctcggag
accagcgccttcagcaagcctatcctctctcatcagaggagccagctgtcgccactcact
gtcaaaccacagcccccagccaggagctcatcccttcccaaggtgagcagccctgcctca
tcagaggtatcaggcaaggatggcctgagcccttctggcagcagccacccatcacctggc
cgcaacaccccagtctccccagcagacccgccactcttcagactcaagtaccccagctct
ccttacagcgctcacatttccaagtccccccggaacacatcacctgcgtgcagtgcacca
tctccagcactctcctactcttcagctggctctgctcgctccagtccagccgatgccccc
gatgagaaggtgcaggccgtgcacagcctcaagatgctctggcagagcacaccccagccc
cccagaggcccccggaaaatatgtcgaggtgcaccgggaaccttgacatcaaaaagagat
gtcctcagcctgctgaatttgtcccctcggcatggcaaggaagagggtggggtagacagg
ctggaactgaaggagctgtctgtgcagcaacatgacgaggtgccacccaaagtccccacc
aatggccactggtgcacagatacagcaacactgacaacagcgggtggccgcagcaccaca
gctgccacgcgccctctgagacttcccttggccaacggctacaagttcctgtccccagga
aggctcttcccttcctccaaatgttaa
DBGET
integrated database retrieval system
