Mastomys coucha (southern multimammate mouse): 116068285
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Entry
116068285 CDS
T07224
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03030
DNA replication
mcoc03410
Base excision repair
mcoc03420
Nucleotide excision repair
mcoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116068285 (Rfc5)
03410 Base excision repair
116068285 (Rfc5)
03420 Nucleotide excision repair
116068285 (Rfc5)
03430 Mismatch repair
116068285 (Rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoc03032
]
116068285 (Rfc5)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116068285 (Rfc5)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116068285 (Rfc5)
DNA replication proteins [BR:
mcoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116068285 (Rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
116068285 (Rfc5)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116068285 (Rfc5)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116068285 (Rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
116068285 (Rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
TIP49
AAA_19
ATPase_2
AAA_30
PhoH
AAA_7
TniB
DNAX_ATPase_lid
nSTAND3
Mg_chelatase
Thioredoxin_6
bpMoxR
AAA_25
NPHP3_N
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
116068285
NCBI-ProteinID:
XP_031193489
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MSAAPSQQQPAAGRARNLPWVEKYRPQTLADLISHRDILSTIQKFISEDRLPHLLLYGPP
GTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLV
ILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELM
VPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHP
LKTDIANILDWMLNQDFTTAYKNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHLL
TKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcgccttcgcagcagcagcccgcggcgggccgggcccggaacctgccctgg
gttgagaagtaccggccacagaccctggcggatctcatttctcacagggacattctgagt
accattcagaagttcatcagtgaagaccggctgccacacctacttctctatggccctcca
gggacaggaaagacatccaccatcctggcctgtgccaagcaactgtacaaagataaagaa
tttggctccatggtcttggagctgaatgcttctgacgaccgagggattgatattgttcgg
gggccaatcctcagctttgccagcacaaggacaatcttcaagaaagggtttaagcttgtg
atcctggatgaagctgatgccatgactcaagatgcccagaatgccttgagacgagtgatc
gagaagttcacggaaaacaccaggttttgcctcatctgtaactacctgtccaagatcatc
cctgccttgcagtcacggtgcacgaggttccgatttggacctctgacacccgagctcatg
gttcctcgactggaacatgtagtacaagaagagaatgtggatataagtgaagatggaatg
aaggcccttgtcactctgtccagtggagacatgcgaagggctttgaacattctgcagagt
accaatatggcctttgggaaggtgacagaggagactgtctacacctgcaccggacaccca
ctcaagacggacattgccaacattctggactggatgctgaatcaagacttcaccactgcc
tacaaaaatatcatggagctgaagactctgaagggcttggcgctgcatgacatcctgacc
gaggttcacttgtttgtgcacagagttgactttccatcttcagttcggatacatttattg
accaaaatggcagacattgagtacagactttctgttggcaccagtgagaagatacagctg
agctccctcattgctgcttttcaagttaccagagacctgatagttgcagaggcctag
DBGET
integrated database retrieval system
