Mastomys coucha (southern multimammate mouse): 116068289
Help
Entry
116068289 CDS
T07224
Symbol
Taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116068289 (Taf1a)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116068289 (Taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
NEW1_HB
Motif
Other DBs
NCBI-GeneID:
116068289
NCBI-ProteinID:
XP_031193497
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MDDFSEELTKFAVAEDNPETWVFSNAGMHFPWLQKHIEAAVTGGKRRKDFAQTTSACLSF
IQEALLKHQWQQAAEYMHSYLQTLEDSDTYKRQAAPEIIWKLGSEILFYHPKSNVETFNS
FADRMKNIGVLNYLKISLQHALYLLHHGMLEDANRNLSEAETWRYGEKSASQAVLLNLVQ
AYKGLLQYYIWSRKKTELSELDEDDYAYTAQTRNMLSQSCKTSTNICALIKTPGVWDPFV
KSYVEMLEFYGDQDGAREMLTNYAYDEKFPSNPNAHVYLYEFLKREKAPRAKLISVLKIL
HEIVPSHTLMLEFHTLLRKSETEEHRKLGLAVLFEVLDFAGCTKNITAWKHLAEYLKQTL
IESRSEWVEEEWKSRRSWWPAFHFSFFWAKSDWKADTDLACEKAFVAGVLLGKGCKYFRY
ILKQDSDTLKKKIKRMKKFVKKYTIVNPGLHT
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttcagtgaagaactgacaaagtttgccgtggcagaggataaccctgaaact
tgggtgttctctaatgcagggatgcatttcccatggctgcagaagcacattgaagctgca
gtgactggagggaagaggaggaaggatttcgctcagacgacaagtgcttgtttaagcttt
atccaggaagccctgctgaagcaccagtggcagcaagctgcagagtatatgcacagttac
ctgcagaccctggaggactcagacacctacaagaggcaggctgcccctgagatcatttgg
aagcttggaagtgaaattctattttaccatcccaaaagcaatgtggagacttttaatagc
ttcgctgaccggatgaaaaatattggtgtcttgaattatttaaagatctccttacagcac
gcgttgtatcttttacatcatggaatgcttgaggatgcaaacagaaatctaagtgaggca
gagacatggcggtacggcgaaaagtcggcttctcaggcagtgttgctgaacctcgttcag
gcctacaaaggccttttacagtactacatttggtccaggaagaagacggagctgtccgag
cttgatgaggatgactacgcctacaccgcacagacccgaaacatgctcagccagagctgc
aagacatctacaaatatctgtgcgctgattaaaaccccgggggtgtgggatccttttgtg
aagagttatgtggagatgctagagttctatggtgatcaagatggagcccgagagatgctc
accaattacgcgtatgatgagaagttcccgtcgaaccccaatgcccacgtctacttatat
gaatttctcaagagagagaaggcaccaagggcgaagctcataagtgttcttaagatttta
catgagattgtgccatcccatacactaatgttagaattccataccttgcttagaaaatca
gagacagaagaacatcggaaactgggcttggcagtattgtttgaagtcttggactttgct
ggatgcactaagaacataacggcctggaaacacttggcagagtatctgaagcagacgtta
atagaaagccgttccgagtgggttgaagaagagtggaaatctaggaggagctggtggcca
gcctttcacttcagcttcttttgggcgaagagtgactggaaggcggacactgatttggct
tgtgagaaagcttttgtagctggagtcctcttagggaaaggttgtaaatattttcggtat
attttaaaacaagattctgacaccttgaagaagaaaatcaaacgcatgaagaagtttgtg
aaaaagtatactattgtaaatccagggcttcacacctag
DBGET
integrated database retrieval system
