Mastomys coucha (southern multimammate mouse): 116068298
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Entry
116068298 CDS
T07224
Symbol
Med13l
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116068298 (Med13l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116068298 (Med13l)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
116068298 (Med13l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
116068298
NCBI-ProteinID:
XP_031193508
LinkDB
All DBs
Position
Unknown
AA seq
2222 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYDKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLINEEHLHMAQSSPAPFQVLVSPYGLNGTLTGHAYKMSDPAARKLIEEWQ
CFYPMVLRKKEEPREEAELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSGTS
AGGHATVAQQGLGSVKDPSNCGMPLTPPTSPEQVIIGESGGVPNAASHLGSQEGGMITMH
SPKRSRKIPPKLHNHMVHRVWKECILNRTQSKRSQMSTPTREEEPAHSPAAAWDFVDPTQ
RVSCSCSRHKLLKRCAVGPSRPPAISQPGFSAGLPSSSSLPPPASSKHKTTERQEKGDKL
QKRPLVPFHHRPSVAEELCMEQDAPGQKLGLAGIDTSLEVSNNRKYDKQMAVPSRNTSKQ
MNLNPMDSPHSPISPLPPTLSPQPRGQEAESLDPPSVPVNPALYGNGLDLQQLSTLEDRT
VLVGQRLPLMAEASETALYSGLRPSYTESSDRWWQSFHLPSSEDAEFRPPELQGERFDAV
LDVNPESTALQRLLAQPNKRFKIWQDEQPQVQPLPFLDPSPLSQQPGDTLGEVNDPYTFE
DGDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSAT
KTDVRQDNAAGRAGSGSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPTVGT
EERPPGKDGRAAGPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGVSSETVTALGMME
SPVVSMVPTHLTEFRMEVEDGLGSPKPEEIKDFSYVHKVPQYQPFVGSSMFAPLKTLPSH
CLLPLKTPDACLFRPSWAVPPKMEQLPMPPAASSIRDGYNNVPSVGSLADPDYLNTPQMN
TPVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQ
GSPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNVFKDRNFDSCCICACNMN
IKGADVGLYIPDSSKEDQYRCTCGFSAIVNRKLGYNSGLFLEDELDIFGKNSDIGQAAER
RLMMCQSSCQSTLLPQVEGARKAPEPPISLLLLLQNQHTQPFASLSFLDYISSNSRHTLP
CVSWTYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHCWPHSNVLDT
SMLSSQDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEE
SPEPLPIPTLLVGYDKEFLTISPFSLPFWERLLLEPYGGHRDVAYIVVCPENEALLEGAK
TFFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTEELVSEWFNQPWSSEESDN
HSRLKLYAQVCRHHLAPYLATLQLDSGLLMPPKHQSPPAEAQGQATPGNAGSLPSNSGSG
APPPGSAFNPTSSSSANPAASSSSASSGPPGSSAASAPGITQMNTTSSSGFGGGVGGQNP
GAGGSSTDRTPGNVACGDTEPGQSCAQPSQDGQDSVTERERIGIPTEPDSADSHAYPPAV
VIYMVDPFTYTAEEDSSSGNFWLLSLMRCYTEMLDHLPEHMRSSFILQIVPCQYMLQTMK
DEHVFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYS
PPFILAPIKDKQTEPGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCVVN
IALPSRTLSAPLSVRSRKSKVSARKIGLQKLWEWCLGIVQMTSLPWRVVIGRLGRLGHGE
LKDWSILLGECSLQTISKQLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTM
GSVFGRSTALNMQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVD
LPFPDDMDNDIGILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPE
ELKQQPLALGYFVSTAKAENLPQWFWSSCPQARNQCPLFLKASLHHHISVAQTDELLPAR
NSQRAPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMN
TL
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcggcgaactgggtggcgaacggggcgagcctggaggattgtcactctaac
ctcttctcgctggctgaactcacaggaatcaaatggcgtaggtacaattttggagggcac
ggggactgtggacccataatttcagccccagcccaagatgatccaatcctgttaagtttc
atccgctgcctgcaagccaacctgctatgtgtatggcgtcgtgatgtcaagccagattgc
aaagagctctggatattctggtggggagatgaacccaacctagtaggagtaatacatcat
gaactgcaggttgtggaagaaggactctgggaaaatggcctttcctatgaatgtaggacg
ctgctcttcaaagcaatccacaatctgttagaaaggtgcctaatggataagaacttcgtg
aggatcgggaagtggtttgtgcgaccctatgacaaggatgaaaagccagtcaacaaaagt
gagcatttgtcctgtgctttcacattctttcttcatggagagagtaatgtgtgtacaagt
gtggagattgctcagcaccagccaatctatttgatcaacgaggaacacttacacatggcc
cagtcttcacccgcaccattccaagtactggtgagtccttatggcttaaatggcacgcta
acagggcatgcatacaagatgtctgacccagctgcccgcaagctaattgaggagtggcag
tgtttctatccaatggtgctgaggaagaaggaggagcctagagaggaggctgagctgggg
tatgacgacgacttcccggtggcagttgaagtcattgttggtggtgtccggatggtctac
ccttcagctttcgtgttgatctctcagaatgatatcccagttcctcagagtggtaccagt
gccggagggcacgccacagttgcacagcaggggcttggtagtgtgaaagaccccagtaac
tgtgggatgcctctgacacctcccacctccccagagcaggtgattataggagagagtggg
ggtgtgccgaatgctgccagtcacctcgggtcccaagaagggggaatgataactatgcac
agtccaaagcgatcaaggaagatccctcctaaactccacaatcacatggtccatagagtc
tggaaggagtgcatcctcaacagaacccagtctaagaggagccagatgtcaacacccact
cgggaagaggagcctgctcacagccctgctgctgcctgggattttgtggacccaacccaa
agagtcagctgctcctgctccaggcataaacttttaaaacggtgtgcagtaggacccagc
cgacctcccgcaatctctcagccaggctttagtgcaggactgccatcatcttcatcctta
ccacctcctgcttcttccaagcacaaaaccacagaaagacaagaaaaaggagacaagttg
caaaagagacccttggtgccctttcaccacaggccttctgtggccgaagagttatgcatg
gagcaggatgcgcctggacagaagctagggctggcagggatagacacctccttagaggtg
tcgaacaatcggaagtatgataagcaaatggccgtgccttccagaaatacaagcaagcaa
atgaatctgaatcctatggattcacctcattcccccatttcccctctgccccccacactc
agccctcagccacgaggtcaggaggcagagagtttggacccaccttctgtccctgtgaac
cctgccctctatggaaacgggctagaccttcagcagctgtccactctagaggacagaact
gtcctcgtaggccaaagactgcctctgatggcagaggccagtgagacagccttgtacagt
gggctcaggccttcatacaccgagtcgtcagacagatggtggcagagttttcatctccca
tccagtgaggatgctgagttccggcctccagagctgcagggggagagatttgatgctgta
ctggatgtgaaccctgagagcactgccctgcaaagactcttagcacaacctaacaagcgg
ttcaaaatctggcaggatgagcagcctcaggtgcagccgctccccttcctcgacccatca
cctctgtcccagcagcctggagacactctgggagaagtcaacgacccgtacacctttgag
gatggtgacataaagtacatcttcacagcaaataagaaatgcaagcaggggacagagaag
gactccctgaaaaagaacaagtcagaggatggatttggtaccaaggatgtcactacacca
ggtcattccacgccggtgcctgatgggaaaaatgccatgtctattttcagttctgctact
aaaacagatgtccggcaggacaatgctgctggcagagctggctccgggagccttacccaa
gtgacagatctggcaccttccctgcatgacttagacaacatctttgataactctgatgac
gatgagcttggggctgtgtcccctgctctacgctcatccaagatgcctactgttgggact
gaggagcggccccctgggaaggatggaagagctgctggcccttaccctccaacagttgca
gacttgcaaaggatgtttcccacccctccgtcattggagcagcatcctgcattttctcct
gtgatgaattacaaagatggagtaagttcagagacagtgactgcattaggcatgatggag
agtcctgtggtcagcatggtgcccacacaccttacggagttcaggatggaagtggaagat
ggcttaggaagccccaaaccagaggagataaaggacttttcctatgtgcacaaagtgccg
cagtaccagccttttgtgggatcctccatgtttgctccactgaagacgctgccgagccat
tgcctgctgccgctgaagacacctgacgcctgtctgttccgtccctcatgggcagttcct
cctaaaatggaacagctacccatgccccctgcagcctcttccattagagacggttacaat
aacgtgcctagtgtcgggagcctcgcagacccagactatctgaacacaccacagatgaac
acgcctgtgaccctcaacagcgctgcccctgccagcaacagtggagctggagtcctccca
tctccagctacccctcgattctctgtccccacaccacgaacccccaggactccaagaact
cccagaggtgggggcactgctagtggccaagggtctgtgaaatacgatagcacggatcag
gggtcaccagcttccaccccttctaccacaaggccccttaactctgtggagcctgccacc
atgcagccaattcctgaggcccacagtctctatgtcaccctcattctgtcagattccgtg
atgaatgtcttcaaggacaggaactttgacagctgttgcatttgcgcctgcaacatgaac
atcaaaggggcagatgtcgggctgtacatccccgattcctccaaggaggaccagtaccgt
tgcacctgtgggttcagtgcaatcgtgaaccgtaaacttggttacaactcgggactcttc
ctcgaagatgagctggatatttttgggaagaattctgacattggccaagctgcagagaga
cgcctgatgatgtgccaatcctcctgccagtccaccttgcttcctcaggtggagggtgcc
cggaaagccccagaacctcccataagcctcctcctcctcctccagaatcagcacacacag
cccttcgcttctctcagctttctggattacatctcctccaacagtcgccataccctcccc
tgtgtgagctggacttatgaccgggtgcaggcagataacaatgattactggacagagtgt
ttcaacgcattggaacagggaaggcaatacgtggataatcccacaggtgggaaagtggac
gaggctctggtgagaagtgccaccgtacactgttggccacatagcaatgtgctggacaca
agcatgctctcatcccaagacgtggtgcgcatgctgctgtccctgcagcccttcctgcag
gatgccatccagaagaagcgcacaggcaggacctgggagaacatccagcatgtgcagggg
ccgctcacctggcagcagttccataagatggcggggcgcgggacctacggttcggaagag
tctccggagccgctgcccatccccactctgctggtgggctacgacaaggagttcctgacc
atctcccccttctccttgcccttctgggaaaggctgctcttggagccctatgggggccac
cgtgatgttgcttatattgtggtgtgtccagaaaatgaggccttgctcgaaggagccaaa
actttcttcagggacttgagtgctgtatatgagatgtgtcggctgggacagcacaagccc
atctgcaaagtgctccgtgacgggatcatgcgtgtgggcaagaccgtggcacagaagctg
acagaggagcttgtgagtgagtggtttaaccagccgtggagcagtgaggagagtgacaat
cattccagactcaaactttatgctcaagtttgccgccatcacctagcaccttatttagcc
actttgcagctcgacagtggcctgctgatgccacctaagcaccagagcccaccagcagaa
gcacagggacaagccacacctgggaatgctgggtctttaccttcgaattcaggctcagga
gcacctccacctggcagtgcattcaaccccacctccagcagctctgcaaaccctgcagca
agtagttcatctgcctcctctgggcctccaggctcttcagctgcctctgctccaggaatc
actcagatgaacactacctcttcttcaggattcggtggtggtgttggagggcagaacccc
ggtgctgggggcagctccacagatcgaactccagggaatgtggcttgtggagacactgaa
cctgggcagagctgtgcccaaccctcacaggatggacaagacagtgttacagagagggag
agaataggaatccccacggagcctgactctgcagacagccatgcctaccctccagccgtc
gtcatttacatggtggatcctttcacctacactgcagaggaggactccagctctggaaac
ttctggctgttgagcttgatgcgctgctacacagagatgctggaccacttacccgagcac
atgagaagctcgttcattctccagattgtgccttgccagtacatgctgcagacaatgaag
gatgaacatgttttctacattcaatacttgaagtccatggcgttctcagtgtactgccag
tgccggcggcctctgcctacacagatccacattaaatccctcacgggctttgggcctgca
gccagcattgagatgactctcaagaacccagagcggcccagtccaatccagctttattcc
cctccttttatattggccccaatcaaagacaagcagacagagccgggagagacctttggt
gaggcgagccagaaatacaatgtgctctttgtgggctattgtctgtctcatgaccagcgc
tggctcttggcatcctgcactgatctgcatggagagttactggagacatgtgttgtaaac
attgctttaccaagcaggaccctttctgctcctctctctgtcaggtcacggaagagtaaa
gtgtccgcacgtaagattgggctgcagaagctatgggaatggtgcctggggattgtccag
atgacatctctgccctggagagttgtcatcggccgcttggggcgtcttggccatggggag
ctaaaagattggagtatcctccttggagaatgttcactgcagacaatcagcaaacagctc
aaggatgtgtgccgcatgtgtgggatctctgctgcagactctccttctatccttagtgcc
tgcctggttgccatggagccccaggggtcctttgtagtgatgccagatgctgtcacaatg
ggctctgtgtttggccgaagcaccgcgttgaacatgcagtcatcccagctgaacacacct
caggatgcctcctgcacccatatcttggtgttcccaacatcatcaaccatccaggtggct
ccagccaactaccccaacgaggatgggtttagccccaacaatgatgacatgtttgtagac
cttccattcccagacgacatggacaatgacattggcatcctcatgactgggaacctccac
tcctctcccaactcctctccggttccctcccctggctctccctctggaattggtgtgggc
tctcacttccagcacagtcggagccagggagagcggcttctgtctcgggaggctccagag
gagctcaagcagcagcccctggcccttgggtattttgtatcaactgccaaagcggagaac
ctcccccagtggttttggtcgtcatgtccccaggcccggaaccagtgcccactcttcctg
aaggcttcactccatcatcacatctctgtagcacagacagatgagctccttcctgccagg
aactctcagcgtgctccacaccctctggactccaagaccacatctgacgttctaaggttt
gtgctggagcagtacaatgccctatcctggctcacgtgcaacccagccacccaggaccgc
acttcctgccttcctgtccactttgtggtgctcacacagttgtacaacgccatcatgaac
acactctga
DBGET
integrated database retrieval system
