Mastomys coucha (southern multimammate mouse): 116068312
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Entry
116068312 CDS
T07224
Symbol
Lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116068312 (Lhx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116068312 (Lhx5)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
116068312 (Lhx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116068312
NCBI-ProteinID:
XP_031193519
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGTDNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggatgtgagcggcccatcctcgaccgctttctgctgaatgta
ctggaccgcgcgtggcatatcaaatgtgttcaatgctgcgagtgcaaaaccaacctttcg
gagaagtgcttctccagggagggcaagctgtactgtaaaaacgacttcttcaggcgcttt
ggcacaaagtgcgccggctgtgcacaaggtatctctccgagcgacctggtgcggaaggcc
cggagcaaagtcttccacctcaactgcttcacctgcatggtgtgcaacaagcagctgtcc
accggagaggaactctacgtgatcgacgagaacaagtttgtgtgcaaggacgactactta
agctcctctagcctcaaggagggaagcctcaactcagtgtcctcctgtacggaccgcagt
ttgtccccggacctccaggatccgttacaggacgaccccaaagagaccgacaactcgacc
tcatcggacaaggagaccgctaacaacgagaatgaggaacagaactccggcaccaaacgg
cgcggcccgcgcaccaccatcaaggccaagcagctggagactctcaaggcggccttcgca
gccacgcccaagcccacgcgccacatccgcgaacagctggcacaggagacaggcctcaat
atgagggtcattcaggtgtggtttcagaaccgaaggtccaaagaacgccgcatgaaacag
ctgagcgctctgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccc
ctgggcggccgcttggacgagtctgagatgttggggtctaccccatacacttattacgga
gactaccaaagcgattactatgctcccggaggcaattacgatttcttcgcgcatggtccg
ccatctcaggcgcaatccccggccgactccagcttcctggcagcatccggacctggctcg
acgccgctgggcgcgctggaaccgccactggccgggcctcacggcacggacaaccccagg
ttcaccgacatgatctcgcacccggacacgccgagccccgagccgggcctgcccggcgcg
ctgcaccccatgccgggagaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcaccagcggctacagcggacccctgtctcaccccaaccctgagctcaacgaagcggcc
gtctggtaa
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