Mastomys coucha (southern multimammate mouse): 116068369
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Entry
116068369 CDS
T07224
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04517
IgSF CAM signaling
mcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116068369 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116068369 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116068369 (Sptbn1)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116068369 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
116068369 (Sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
PH_11
Motif
Other DBs
NCBI-GeneID:
116068369
NCBI-ProteinID:
XP_031193639
LinkDB
All DBs
Position
Unknown
AA seq
2401 aa
AA seq
DB search
MLIRNATGLRSSPFAWAGAEPRGSCLELDGGRRGLKRDSYGAAGLGLRSGIMELQRTSSI
SGPLSPAYTGQVPYNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLARVSCRITDLYTDL
RDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGN
HRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSW
RDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPD
EKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTI
IILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYM
PREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQ
RLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVARELEAENYHDIKRITAR
KDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLSQDYGKHLLG
VEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRVAHMEFCYQE
LCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKILSSDDYGKDLTSVMRLLSKHRA
FEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIIYIREQWANLEQLSAIRKKRLEE
ASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEITNYRPTIDT
LHEQASALPQAHAESPDVKGRLAGIEERYKEVAELTRLRKQALQDTLALYKMFSEADACE
LWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPS
EKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYHLECNETKSWIREKTKVIESTQ
DLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAILSRLAEISD
VWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLMEAEKLLT
QHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQ
NLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANE
EKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKNREAASELLMRLKDNRDLQKFLQ
DCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLDKIEKEGMQLIS
EKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDANKAELFTQSCADLDKWLHGLESQ
IQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQSQAQALSQEGKSTDEVDSKRLT
VQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILWVGERMPLATSTDHGHNLQTVQL
LIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNAEAIRQRLADLKQLWGLLIEETE
KRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDDQSAVSMLKKHQILEQAVE
DYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQ
LNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDIVNTMA
DDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQ
DKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDI
QKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRD
VSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASEEIKEKLLQLTEKRKEM
IDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAF
EKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPPSPEPSTKASEEAESQQWDTSK
GDQVSQNGLPAEQGSPRMAGTMETSEMVNGAAEQRTSSKESSPVPSPTSDRKAKSALPAQ
SAATLPARTLETPAAQMEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSA
ASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQGRDDDEMNTWIQAIS
SAISSDKHDTSASTQSTPASSRAQTLPTSVVTITSESSPGKREKDKEKDKEKRFSLFGKK
K
NT seq
7206 nt
NT seq
+upstream
nt +downstream
nt
atgctaatcaggaatgctactggcttgaggtccagccctttcgcctgggcgggagcggag
ccgcgcggaagctgcttggagttggatgggggtaggagggggctgaagcgggattcctac
ggtgcagccggcctgggccttaggtcgggcataatggaattgcagaggacatccagcatt
tcagggccactgtcgccggcctacaccgggcaggtgccttacaactacaaccaactggaa
gggagattcaaacagctccaagatgagcgtgaagccgtacagaagaagaccttcaccaag
tgggtcaattcccaccttgcccgagtgtcctgccgaatcacagacctatacactgacctt
cgagatggacggatgctcatcaagctactggaggtcctctctggagagaggctgcctaaa
cccactaagggacggatgcggatccactgtctggagaatgtggacaaggctcttcaattc
ctgaaggagcagagagtccatcttgagaacatgggctcccatgacattgtggatggaaac
caccggctgaccctcggcctcatctggactatcattctacgcttccagatccaggatatc
agtgtggagactgaagataacaaagagaaaaagtctgctaaggatgcattgctgctgtgg
tgccagatgaagacagctgggtaccccaatgtcaacattcacaatttcaccactagctgg
agggatggcatggccttcaatgcactgatacacaaacaccggcctgacctgatagatttt
gataaactgaagaaatctaatgcacactacaatctgcagaatgcatttaacctggcagag
cagcaccttggcctcactaagctgctagaccctgaagatatcagtgtggaccatcctgac
gagaagtctatcatcacatacgtggtgacttactaccactacttctccaagatgaaggcc
ttggctgtcgaaggaaagcgcattggaaaggtgcttgataatgctatagaaacagagaaa
atgattgagaagtacgagtcacttgcttctgatcttctggagtggattgaacaaaccatc
atcatcctaaacaaccgcaaatttgctaattcactggttggggtccagcagcagcttcag
gcattcaacacgtaccgcacagtggagaaaccaccgaagtttactgagaaggggaatttg
gaggtgctgcttttcacaattcagagcaagatgagagctaataatcagaaggtctacatg
ccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactggaaaaagca
gaacatgagagagaactggctctgcggaatgagctcatacggcaggaaaaactggaacaa
ctcgcccgcagattcgatcgcaaggcagctatgagggagacatggctgagcgaaaaccag
cgtcttgtgtctcaggacaactttggatttgaccttcccgcagttgaggccgccaccaaa
aaacatgaggccattgagacagacatcgctgcatatgaagaacgagttcaggctgtggtg
gccgtggccagggagcttgaagcagagaactaccacgacatcaagcgtatcacagcgagg
aaggacaatgtcatccggctctgggaatacttgctggaactgctcagggccaggaggcag
cgtcttgagatgaacctgggactgcagaagatcttccaggaaatgctttatattatggac
tggatggatgaaatgaaggtgctattgctgtctcaagactatggcaaacacctacttggt
gttgaagacttgttacagaagcatgccctggttgaagcagacattgcaatccaagcagag
cgagtaagaggtgtgaatgcctctgcccagaagtttgcaacagatggggaaggctacaag
ccatgtgacccccaggtaatccgagaccgtgttgcccacatggagttctgctatcaagag
ctttgtcagctggcagcagagcgtagggctcgcctggaagagtctcgtcgcctctggaag
ttcttctgggagatggcagaagaggaaggctggatacgggagaaagagaagatcctgtcc
tctgatgattacgggaaagacttgactagtgtcatgcgcctgttgagcaagcaccgggca
tttgaggatgagatgagtggccgtagtggccattttgaacaggccattaaagaaggtgaa
gacatgattgcagaggaacacttcggatcagaaaagatccgtgagagaatcatttatatc
cgggagcagtgggccaacctggaacagctctcagccattaggaagaagcgcctagaggag
gcctcgctactgcatcagttccaggctgatgctgatgatattgatgcttggatgttagat
atactcaagattgtctccagcaatgatgtgggccatgatgagtactctacacaatctctg
gtcaagaagcataaagatgtagcagaagagatcaccaactacaggcccactattgacaca
ctgcatgagcaagccagtgcccttccacaagcacatgcagagtctccagatgtgaagggc
cggttggcaggaattgaggagcgctacaaggaggtggcagagttaacacggctaagaaag
caggctctgcaggacaccctggccctgtacaagatgttcagcgaggctgatgcctgcgag
ctctggattgacgagaaggagcagtggctcaacaacatgcagatcccagagaagctggag
gacctggaagtcatccagcatagatttgagagcctagaaccagaaatgaacaaccaggct
tccagggttgctgtggtgaaccagattgcacggcagttgatgcacagtggccaccccagt
gaaaaggaaatcagagctcagcaagacaaactcaacacgaggtggagtcagttcagagaa
ctggtggacaggaaaaaagatgctcttctgtctgccctgagcatccagaactaccacctc
gagtgcaatgaaaccaaatcctggatccgggagaagaccaaggtcatcgagtctacccaa
gaccttggcaatgacctggcaggtgtcatggccctgcagcgcaagctgaccggcatggaa
cgagacttggtagccattgaggcgaaactgagtgacctgcagaaggaagctgagaagctg
gagtccgagcaccctgaccaggctcaagctatcctgtctcggctggccgagatcagtgac
gtgtgggaggagatgaagacaaccctgaagaaccgagaggcctcactgggagaggccagc
aagctgcagcagtttctgcgggacttggacgacttccagtcctggctctccaggacccag
actgctattgcctcagaggacatgcccaacaccctgatggaggcagagaagcttctcaca
cagcacgagaatatcaaaaatgagattgacaattatgaggaagactaccagaagatgcgg
gacatgggtgagatggtcacccagggacagactgatgcccagtacatgtttctgcggcag
cggttgcaggccttggacaccggctggaatgagctccacaagatgtgggagaacaggcaa
aatctcctctctcagtcccatgcctaccagcagttccttagggacacgaagcaagcggaa
gcttttcttaataaccaggagtatgttttggctcatactgaaatgcccaccaccctggaa
ggtgctgaagcagccattaaaaagcaggaggacttcatgaccaccatggatgccaatgag
gagaagatcaatgctgttgtagagactggccgaagactggtgagcgatgggaacatcaac
tctgaccgcatccaggagaaggtggattctattgatgacagacacaggaagaatcgagaa
gcagccagtgaacttctgatgaggttaaaggacaaccgagatttacagaaattcctgcaa
gattgtcaagagctctccctctggatcaatgaaaagatgcttacagctcaggacatgtct
tatgatgaagccagaaatcttcacagtaaatggttaaagcatcaagcatttatggcagaa
cttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagcttatttca
gaaaagccagaaacagaagctgtggtaaaggagaaactcactggtttacataagatgtgg
gaagtccttgaatccacaacccagaccaaggcccagcggctctttgatgctaataaggct
gagcttttcacacagagctgcgcagatcttgacaaatggctacatggcctggagagccag
attcaatctgacgactatggcaaagaccttaccagtgtcaatattctgctgaaaaagcaa
cagatgctggagaatcagatggaagttcggaagaaagagatcgaggaactgcagagccaa
gcccaggcactgagtcaggagggcaagagcacagatgaggtggacagcaaacgcctcact
gtgcagaccaagttcatggagcttctggagcccttgaatgagaggaagcataatctgtta
gcttccaaggagatccaccagttcaaccgggatgtggaggacgagattctgtgggttggc
gagaggatgcctttggcaacttccacagatcatggccataaccttcaaactgtgcagctg
ttaataaagaaaaaccagaccctccagaaagaaatccaggggcaccagcctcgtattgat
gacatctttgagaggagtcaaaacatcatcacagacagcagcagcctcaatgccgaggcg
atcaggcagaggctcgctgacctgaagcagctgtgggggctcctcatcgaggaaactgag
aaacgccatagacggctcgaggaggcacacaaggcccaacagtactactttgatgcagcc
gaagcagaggcatggatgagtgaacaggaactgtacatgatgtctgaggaaaaggccaag
gatgatcagagtgctgtctccatgttgaaaaagcaccagattttggaacaagctgttgag
gactatgcagagacagtgcaccagctctccaagactagccgggcgctggtggctgacagc
catcccgaaagtgagcgtattagcatgcggcagtccaaggtcgacaagctgtatgctggc
ctgaaggatcttgctgaggagaggagaggaaaacttgatgagaggcacagactgttccag
ctcaacagggaggtagatgacctggaacagtggattgctgagagggaagtggtcgcaggc
tcccatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttccgagag
tttgctagagacacaggaaacattgggcaggagcgtgtggatatagttaataccatggca
gatgacctcatcaactctggacattcagatgctgccaccattgctgagtggaaagatggt
cttaatgaagcctgggctgacctcctcgagctcattgacacaagaacacagattcttgct
gcctcgtatgaacttcataagttttaccatgatgccaaggagatctttggccgcatccag
gacaaacacaagaaactccctgaggagcttggaagagatcagaacactgtggaaacttta
cagagaatgcataccacctttgagcatgacatccaagctctgggcactcaggtgaggcag
ctgcaggaggatgcagcccgcctccaggcagcctatgcaggggacaaggctgatgacatc
cagaagcgtgagaatgaggtcctggaagcctggaagtccctgctggatgcttgtgagggt
cgcagggtgcggctggtagacacaggagacaagttccgctttttcagcatggtgcgtgac
ctcatgctctggatggaagatgtcatccggcagatcgaggcccaggagaaaccacgggat
gtgtcctctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatcgatgct
cgtaatgacagctttacagcttgcattgaacttgggaaatccctgctggcaaggaaacac
tatgcttctgaggagattaaggaaaagttactgcagttgacggagaaaagaaaagaaatg
attgacaagtgggaagaccggtgggagtggctaagactgattttggaggtccatcagttc
tcaagggatgccagtgtggcagaggcttggctgctcggacaggaaccatacctatccagc
cgcgaaattggccagagtgtagacgaagtggagaagcttattaagcgccatgaggcattt
gaaaagtctgcagcgacctgggacgagagattctctgccctggaaaggctgacaacattg
gagctactggaagtgcgcagacagcaagaggaagaagaaagaaagagaaggccaccttct
ccagagccaagcacgaaggcttcagaggaggctgagtcccagcaatgggatacttcaaaa
ggagaccaagtttcccagaatggtttgccggctgagcagggatctcctcggatggcagga
accatggaaacaagtgaaatggtcaacggtgctgctgagcagaggacgagctccaaagag
tccagtcctgttccctcccccacctcggaccgaaaggccaaatctgcacttccggcccag
agtgctgccaccctgccagccaggaccctggagacgcctgcggcccagatggaaggcttc
ctcaatcggaagcatgagtgggaggcccacaataagaaagcctcgagcaggtcctggcac
aatgtatattgtgtcataaataaccaagaaatgggcttctataaagatgcaaagagtgct
gcttctggcatcccctaccacagtgaggtccctgtgagtttgaaagaggccatctgtgaa
gtggcccttgattacaagaagaagaagcacgtgttcaagctaagactaagtgatgggaac
gagtacctcttccagggcagagacgacgatgaaatgaacacatggatccaggctatctcc
tctgccatctcctctgacaaacacgacacatcggccagcacccagagtacgccagcatcc
agccgggcgcagaccttacccaccagcgtcgtcaccatcaccagcgagtccagtcctggc
aagagggagaaggacaaagagaaagacaaagagaagcggttcagccttttcggcaagaag
aagtga
DBGET
integrated database retrieval system
