Mastomys coucha (southern multimammate mouse): 116068426
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Entry
116068426 CDS
T07224
Symbol
Sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116068426 (Sbno1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116068426 (Sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116068426
NCBI-ProteinID:
XP_031193795
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDVDGGDASLTTPTPPSVQQSVPLSALELGLETEAAV
PVKQEPETMSTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPATTNRQTITLT
KFIQTTANTRPSVSAPAVRNAMPPAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVAT
AATDVSNGAVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAVTYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAER
DLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGV
TFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVL
QSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKIKKRKGEEITREAKKARK
VGGLTGSSSDDSGSESDISDNEESDYESSKNMSSGDDDDFNPFRDESSEDNEDDPWLIRK
DHKKSKDKKKKKSIDPDSIQSALLASGLGSKRPSFSSAPVISPASNSAPAHSNSNSNSSL
ITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSND
DGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRV
HMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTH
GDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIG
VGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGR
YDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGP
DDGFYLSLQIRNNKKTAILVKEVNPKKKLFLIYRPNTGKQLKLEVHADLKKKYKKVVSDD
ALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGV
LASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQQ
HHPQSITNLSNM
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagggcaagatttactgcttgctgccttgagcgagagtgggattagtccg
aatgacctctttgatgttgacggtggagatgctagccttaccacccctactcccccttca
gttcaacagtcggtgccacttagtgcattagaactaggtttggagacagaagcagcagtt
cctgtcaaacaagaaccagagacgatgtctactcccgcactgttaaatgtgaggcagcag
cctccatctactacaacatttgtgctgaatcaaataaatcaacttccgaccttgggatct
acaattgtaatgactaaaacaccacctgcaacaacgaataggcaaaccatcactttgaca
aagttcatccagaccactgcaaacacacgcccttcagtttcagcaccagcagtacgaaat
gccatgccccctgctccttcaaaagaccaggttcagttaaaggatttactcaaaaataat
agtttaaatgaactcatgaaactgaagccacctgccaatattgctcagccagttgcaact
gctgctactgatgtcagtaatggtgcagttaaaaaagagtcttctaataaagaagtagca
aggatatggataaacgacatgaagatgaggagtttctccccaactatgaaggttcctgtt
gttaaagaggaagatgaaccagaagaagaagatgaggaagaaatgggtcatgctgagacc
tatgcagagtatatgccaataaaattaaaaattggcctgcgtcaccccgatgcagtggtg
gagactagctctctgtccagtgtcactcctcctgatgtttggtacaaaacctccatctct
gaagagaccattgataatggctggctctccgcattgcagcttgaagcagtcacctatgcg
gcccagcaacatgaaacattcctccctaacggagaccgtgctggcttcttaataggcgat
ggtgctggtgtgggtaaaggccggacaatagcagggatcatatatgaaaactatttgttg
agtagaaaaagagcattgtggtttagtgtatcaaatgacttaaaatatgatgctgaaaga
gatttaagggatattggagcaaaaaacattttggtccattcgttaaataagtttaaatat
ggaaagatttcttccaaacacaatgggagtgtgaaaaaaggtgttatttttgctacctat
tcttcccttattggtgaaagccagtctggtggtaaatataagaccaggttgaaacagctt
ctgcactggtgtggtgacgactttgatggagtgatagtgtttgatgaatgtcacaaagca
aaaaacttatgtcctgttggttcttcaaagccaaccaagacaggcttggctgttttagag
cttcagaacaaattgccaaaagcaagagttgtgtatgccagtgctactggtgcttctgaa
ccacgcaacatggcctatatgaaccgtcttggaatatggggtgagggaactccattcaga
gaattcagcgattttatccaagccgtggaacgcagaggtgttggtgccatggaaattgtt
gctatggatatgaagcttagaggaatgtacattgcacgacagctcagctttactggagtg
accttcaaaattgaggaagttcttctttctcaaagctatgttaaaatgtataacaaagca
gtcaagctgtgggttatcgctagagagcgatttcaacaagctgcagatttgattgatgct
gagcagagaatgaagaaatctatgtggggtcagttctggtctgctcaccagaggtttttt
aagtacctgtgtatagcgtccaaagtgaaaagggtggtgcagctggctcgggaagagatc
aagaatgggaagtgtgttgtaattggtctgcagtctacaggagaagccaggactttagag
gccttggaagaaggtggaggagaactaaatgattttgtttcaactgccaaaggggtattg
cagtcactgattgaaaaacacttccctgctccagacaggaagaaactttatagtttgcta
ggaattgatttgacagccccaagtaacaacagttcaccaagagatagtccttgtaaagaa
aataaaataaagaagcggaaaggtgaagaaattactcgagaagccaaaaaagcacgaaaa
gttggtggccttactggaagcagttctgacgacagtggaagtgagtctgatatttctgat
aatgaagaaagtgactatgagagctctaaaaacatgagctctggggatgatgacgatttc
aatcccttcagagatgagtccagtgaagacaacgaggacgatccgtggttaattaggaaa
gatcataagaaaagcaaagataaaaaaaagaagaaaagtatagatccagattccattcaa
agtgccttgttagcatcaggtcttggatcaaagcgacctagtttctcctctgcaccagtc
atctcacctgcttccaacagtgcaccagcccacagtaacagcaacagtaacagcagcctt
ataacaagtcaagatgctgttgaaagggcacaacagatgaagaaagacctgcttgataaa
ctagaaaaattagctgaagaccttcctccaaacaccctggatgaacttattgatgaactt
ggtggtcctgaaaatgtggctgagatgactggccgcaagggtcgggtcgtgagcaatgat
gatggaagcatatcatacgagtcgaggtctgagcttgatgtgcctgtggagattctaaac
atcacggagaagcagaggttcatggatggagacaagaatattgctattatctcagaagct
gccagctcaggtatttcattacaagcagatcggagagctaaaaatcaaaggcgaagagtt
cacatgactttagaattaccctggagtgctgatagggcgattcagcaatttggaagaaca
cacaggtcaaaccaagtgaccgctccagagtatgtctttttgatttcggaactggctgga
gaacagagatttgcgtctattgttgctaagagacttgagagtttgggggcactcacacat
ggtgacagaagagcaacagaatctagagatctgagcaggttcaactttgacaacaagtat
ggaagaaatgctttagaaatcgttatgaaatccattgtaaacttggattctcctatggta
tcaccccctccagactaccctggagaattctttaaagatgttcggcaaggactaatagga
gtgggcttgattaatgtagaagatcgctcaggaattcttactcttgataaagactataac
aatataggaaaattcttaaacagaattttgggcatggaggtgcatcagcagaacgcattg
tttcagtattttgcagacacacttactgcagttgttcagaatgccaagaagaatggaaga
tacgatatgggaatcctagatctgggttctggagatgaaaaggtgaggaagagtgatgtc
aagaagtttctaactccagggtattcaacctctggccatgtagagttatacacaattagt
gtggagaggggaatgtcctgggaggaagcaaccaagatttgggcagagctgactggaccg
gatgatggcttttacttatcattgcaaataagaaacaacaaaaaaactgcaatcttagtt
aaagaagtaaaccctaagaagaaactatttttaatttatcgaccaaacactgggaagcaa
ctcaaattagaagttcatgctgatctgaaaaagaaatataagaaggtagtctctgatgat
gccctggtacactggctggatcagtataactcctctgcagacacctgtactcatgcatac
tggcgtggcaattgcaaaaaagcaagtttaggattggtatgtgagattggtctccgctgc
cgtacgtattatgtactatgtggctcagtactgagcgtctggacaaaagtggagggtgtt
cttgcctctgtcagcggcacaaatgtgaaaatgcagatagtgcggctaaggaccgaagat
gggcagcgcatcgtaggtttgatcattccagcaaattgtgtgtctcctcttgtaaatctc
ctgtcaacttcagaccagtctcagcagctcgcagtccaacaaaaacagctgtggcaacag
catcacccacagagcatcaccaacttgagcaacatgtaa
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