Mastomys coucha (southern multimammate mouse): 116068435
Help
Entry
116068435 CDS
T07224
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcoc03009
]
116068435 (Ddx55)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116068435 (Ddx55)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
Pre-60S particles
Helicases
116068435 (Ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Cas3-like_C_2
SBF_like
Motif
Other DBs
NCBI-GeneID:
116068435
NCBI-ProteinID:
XP_031193819
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MEHVTEGAWESLQVPLHPRVLGALRELGFLHMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGG
RNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMG
FEASINTILELLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALVKKVKILCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMNLQRNTVDLLPKLRAMALADRAVFEK
GMKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLRMPRMPELRGKQFPDFVPVDID
TDTIPFKDKIREKQRQKLLEQKRKERIENEGRRKFIKNKAWSKQKAKKERKKKMNAKRKK
DEGSDIDDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSAKRTVQLTDLGVSDSEEDS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtgacggagggtgcctgggagtcgctgcaggtgccgctgcatcctcgggtg
ctcggagcactgcgcgagttgggcttcctgcacatgacgccggtgcagtctgccaccatc
cctctgttcatgaaaaacaaagatgtcgccgcggaagctgtcactggtagtggtaaaacc
ctggcttttgtcattcctattctggagattcttctgagaagggaggagaagttaaagaag
aaccaggtaggagccatcgttatcaccccaactcgggagctggccattcagattgatgag
gtcctgtcacacttcacgaagcacttcccgcagttcagccagattttgtggatcggaggc
cggaaccctggagaagatgtggagaggttcaagcagcatggcgggaacatcattgtggca
accccaggccgcctggaggacatgttccggaggaaggctgagggtctggacctggccagc
tgtgtgaagagcttggacgtgctggtgctggatgaggcagacagactgcttgacatgggc
tttgaggcaagcataaacacaatcctggagttgttgccaaagcagaggagaacaggcctt
ttctcagccacacagacacaggaagtggagaacttggtgcgagcaggcctccggaaccct
gtccgaatctctgtgaaggagaaaggtgtggcagccagcagcacccagaagaccccgtcc
cgtctggagaaccactatatgatttgtaaggcagatgagaaattcaaccagctggtccat
ttccttcggagccgtcagcaggagaagcacctggtgttcttcagcacgtgtgcgtgtgtg
gaatactatggaaaggccctggaggcactggtgaagaaggtgaagatcctgtgcatccac
gggaagatgaagtacaagcgcaataagatcttcatggagttccgcaagctgcagagtggg
atcttggtgtgcactgacgtgatggcccggggaattgatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcaatgccagtgccttcgtgcatcgatgtggacgcacagcc
cgcattggccacggtggcagtgctctggtgttcctgctacccatggaggaggcgtacatc
aacttcttggccatcaaccagaaatgccccctgcaggagatgaacctccagagaaacact
gtagaccttctgccgaagctccgggccatggctctggctgacagagccgtgttcgagaag
ggcatgaaagcctttgtgtcctttgtgcaggcttatgcaaaacatgagtgcagcctcatc
ttcaggctgaaggatcttgactttgccgggcttgctcgaggctttgccctattgaggatg
cccaggatgccagaactaagggggaagcagtttccagattttgtaccagtggacattgat
actgacacgattccatttaaagataaaattagagaaaaacagaggcagaaacttttggag
cagaaaagaaaagagaggatagaaaatgaagggagaagaaaattcattaaaaataaagct
tggtcgaaacagaaggccaaaaaggaaagaaagaagaagatgaatgcaaaaaggaaaaag
gatgagggttctgatattgatgatgaagacatggaggaactccttaatgatacaaggctc
ttgaaaaaatttaaaaaaggtaaaatcacagaagaagaatttgagaaggggctattgaca
agtgccaaaaggactgtccagctgacagatttaggtgtctcagactcggaagaggacagt
tga
DBGET
integrated database retrieval system
