KEGG   Mastomys coucha (southern multimammate mouse): 116068560
Entry
116068560         CDS       T07224                                 
Symbol
Polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03020  RNA polymerase
mcoc03420  Nucleotide excision repair
mcoc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116068560 (Polr2j)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116068560 (Polr2j)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    116068560 (Polr2j)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcoc03021]
    116068560 (Polr2j)
   03400 DNA repair and recombination proteins [BR:mcoc03400]
    116068560 (Polr2j)
Transcription machinery [BR:mcoc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     116068560 (Polr2j)
DNA repair and recombination proteins [BR:mcoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116068560 (Polr2j)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 116068560
NCBI-ProteinID: XP_031194124
LinkDB
Position
Unknown
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcccctccggccttcgagtcgttcttgctcttcgagggcgagaagaaaatcacc
attaacaaggacaccaaggtgcccaacgcctgcttgttcaccatcaacaaagaagaccac
actctggggaacatcattaaatcccagctgttgaaggacccacaggtgctgtttgctggc
tacaaagtccctcaccccttggagcacaagatcatcattcgcgtgcagaccaccccagac
tacagtccccaggaggctttcaccaacgccatcacagacctcatcagcgagctctccctt
ctggaggagcgattccgggtggccatcaaggacaagcaggaaggaattgaatag

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