Mastomys coucha (southern multimammate mouse): 116068617
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Entry
116068617 CDS
T07224
Symbol
Taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116068617 (Taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116068617 (Taf6)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116068617 (Taf6)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116068617 (Taf6)
Coactivators
SAGA/TFTC/STAGA complex
116068617 (Taf6)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116068617 (Taf6)
STAGA complex
116068617 (Taf6)
TFTC complex
116068617 (Taf6)
SAGA complex
116068617 (Taf6)
SLIK complex
116068617 (Taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
116068617
NCBI-ProteinID:
XP_031194282
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG
KGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDAYRGEFGSLGPLLCSHVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPAGP
GSVQKYIVVSLPPTGEGKGGPPSHPSPVPPSSSSPSPLGGSTLCGGKQEAGDSPPPAPGT
PKANGSQPTGPGSPQAAL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaaactgaaactcagcaatacggtgttgccctctgagtccatgaag
gtggtggcagaatctatgggcattgctcagattcaggaggagacttgccagctgctgaca
gatgaggtcagctaccgcatcaaggagattgcgcaggatgctttgaagttcatgcacatg
gggaaacgacagaagctcactaccagtgacattgactatgcattgaagctaaagaatgtg
gagccactgtatggcttccatgctcaggagttcatccctttccggtttgcctctggtggg
ggccgggagctatacttctacgaagaaaaggaagtggacctgagtgatatcattaacacc
cctctgccacgggtgcctctggatgtctgcctcaaagctcattggctgagcatcgaaggc
tgccagccagctataccagagaatccacccccagcacccaaagagcagcagaaggctgag
gccacagaacccctaaaatcagcaaagccaggtcaagaagaagatggacccttgaaaggc
aaaggtcaaggggcagctgcagctgatggcaaaggaaaagagaagaaggcacctcccttg
ctggagggggcccctttccgcctgaagccccgcagcatccatgagctgtctgtggagcag
cagctgtattacaaggagatcacggaagcctgtgtgggatcctgtgaggccaagagagcg
gaagctctgcagagcattgccacggacccagggctctatcagatgctaccacggttcagt
accttcatctcagagggggtccgtgtgaatgtggttcagaataacctggccttgctcatc
tacctgatgcgtatggtgaaggccctgatggacaaccccacactgtatctagagaaatat
gtgcatgagctgattccagcagtaatgacctgcattgtgagtagacagctgtgcctgcgg
ccagatgtggacaatcactgggcactccgggattttgctgcccgtctagtggcccagatc
tgtaagcatttcagcacaaccaccaacaacatccaatcccgaatcactaagacctttacc
aagagctgggtagatgagaagactccatggacaactcgatatggctccattgcaggcctg
gcagagctgggacatgatgtaattaagacgctaattctgccaaggctgcagcaggaaggg
gaacggatccgaagtgtcttggatgggcctgtgctgagcaatatcgaccgtattggagca
gaccatgtgcagagccttctcctgaaacactgtgccccagtacttgcgaagctgcgccct
ccacccgacaatcaggatgcctaccggggagaatttgggtcccttgggccccttctctgc
tcccatgtggtgaaggccagggcccaggctgctctacaagctcagcaggtcaacaggacc
acactcaccatcacacagcctcgacccacactgaccctctcacaggcccctcagccaggc
cctcgtacccctggcttattgaaggtcccaggctccattgccttgccagttcagacactg
gtgtctgcgagagctgctgcccctcctcagccttctcctcctccaaccaagtttattgta
atgtcctcatcttccagtgcctcatcgacccagcaggtcctgtccctcagcacctcagct
cctggctcaggctctaccactacctctcctgtcaccaccacggttcccagtgtgcagccc
attgtcaagctggtctccactgctaccactgcacccccaagtacagcccctgctggtcct
ggcagtgttcagaaatacatcgtggtctctcttcccccaacaggggaaggcaaaggaggc
cctccttctcatccttctccagttcccccttcatcttcttcaccatccccacttgggggc
agtaccctctgtggggggaagcaggaagctggggacagcccccctccagctccagggact
ccaaaggctaatggctcccagcccactggacctggctctccccaggctgctctgtga
DBGET
integrated database retrieval system
