Mastomys coucha (southern multimammate mouse): 116068694
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Entry
116068694 CDS
T07224
Symbol
Wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04136
Autophagy - other
mcoc04140
Autophagy - animal
mcoc05010
Alzheimer disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05016
Huntington disease
mcoc05017
Spinocerebellar ataxia
mcoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116068694 (Wipi2)
04136 Autophagy - other
116068694 (Wipi2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116068694 (Wipi2)
05014 Amyotrophic lateral sclerosis
116068694 (Wipi2)
05016 Huntington disease
116068694 (Wipi2)
05017 Spinocerebellar ataxia
116068694 (Wipi2)
05022 Pathways of neurodegeneration - multiple diseases
116068694 (Wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116068694 (Wipi2)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116068694 (Wipi2)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116068694 (Wipi2)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116068694 (Wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_RSE1_2nd
BCAS3_WD40
VID27
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
116068694
NCBI-ProteinID:
XP_031194439
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLEAVREKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICSLTTIQKIPRLLVGASDGYLYMYNLDPQEGGECALMRQHRLDGS
METTSEIVDSASHDCPLATQTYGTAAAKGAYVPSSPTRLGKGQDANLEAYTDDLGAVGGA
CLEDEASALRLDEESEHPPMILRTD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagccagagcggagaggccggcgccggccagctgctgttcgccaacttc
aatcaggataacacgtccctagctgttggtagtaagtccgggtataagtttttctccctt
tcttctgtggataagctggaacagatctatgaatgcactgacaccgaagatgtctgcatt
gtggagagattgttctcaagcagcttggtggccattgtcagtctcaaagctcccaggaag
ctgaaggtttgccactttaagaagggaactgagatatgcaactacagctactccaacaca
atactggctgtgaagctgaacaggcagaggctcattgtgtgtctggaagagtcactctat
atacacaacatccgagacatgaaggtacttcataccatccgagagacacctccaaaccct
gcaggcttgtgtgcactgtcaataaacaatgacaactgctacttggcgtatccagggagt
gcgaccattggagaggtgcaggtcttcgacaccattaacttgagggctgcaaacatgatc
ccagctcatgacagtcccttagcagccctggcttttgatgcaagtgggaccaagcttgcc
actgcttctgagaaggggactgtgattcgggtgttttccattccagagggacagaagcta
tttgagttcagaagaggagtgaaaaggtgtgtgagcatctgctccctggccttcagcatg
gacggcatgttcctctccgcatccagcaacaccgaaacagtgcacatcttcaaacttgag
gctgtgagggaaaaacctccggaagagcctaccacctggactggctactttgggaaggtt
ctcatggcatctaccagctacctgccctcacaagtgacagaaatgttcaaccagggcagg
gcctttgccaccgtccgcctgccattctgtggccacaaaaacatctgctcactaaccaca
attcagaagatcccacggttgctggtaggagcatcagatggctatttgtacatgtacaac
ctggacccccaagaaggcggcgagtgtgcactgatgcgtcagcacaggcttgatggcagt
atggagacaaccagtgaaattgtagactctgcatctcatgactgccccttagcaacgcag
acatacggcacagcagctgccaaaggtgcctatgtgccctcgtcccccacaagacttggt
aaagggcaggacgccaacttagaagcttacacagatgacctgggtgctgtgggtggtgca
tgcctagaggatgaagccagcgctctgcgcctggatgaagagagcgaacatcctcccatg
attcttcggactgactga
DBGET
integrated database retrieval system
