Mastomys coucha (southern multimammate mouse): 116068718
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Entry
116068718 CDS
T07224
Symbol
Usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116068718 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116068718 (Usp42)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116068718 (Usp42)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116068718 (Usp42)
Ubiquitin system [BR:
mcoc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116068718 (Usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
116068718
NCBI-ProteinID:
XP_031194501
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MTIVDKTEPSDPSTCQKQPGSSEAVSPEDMDTGSASWGAVSSMSDVSNHTLSLGPVPGAV
VYSNSSVPEKSKPSPPKDQVLGDGIAPPQKVLFPSEKICLKWQQSHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPSGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFYIRSHDVKNGGEP
AHPAHSPGQSSPRPGISQRVVNNKQAAPGFIGPQLPSHVMKNTPHLNGTTPVKDTPSSSV
SSPNGNTSVNRASPATSSTSVQNWSVSRPSVIPEHPKKQKITISIHNKLPVRQGQAQLNN
NLHGTCLEAPSKAAPSSTITNPSAIQSTSNVPATSVSNKVAKSVSPSESCSKPMVNGKAK
VGSSVLVPYGAESSEESDEESKGLAKENGVDMKASTHSDRPEAAAEEDAEASPHELQEPV
MLNGANSADSDSRENSLAFDSASCQVQTELHTENLFSKLNGLPGKVTPAPLQSVPEDRIL
ETFKLTNQAKGPVGEESWTTTGGSSPKDSVSQPEPVSDEPSPLEIPEAVTNGSTQTPSTM
SSLEPTISCTKEDSSVVVSAEPVEGLPSVPALCNSTGTTLEDAPVPESCDPGDLTANPSQ
PTQAVKGDTAENAQDSALAEVVERLSPAPSVLTGDGCEQKLFLYLSTEGSEEAEDSSRSS
AVSADTMLPQPDRTTTSSCEGAAEQAAGDRGDGGNMGPKAQEPSPAKEKMSSLRKVDRGH
YRSRRDRSSSGEHVKDSRPRPEDHHHKKRHCYSRERPKQERHPANNTYCNGSQHLGHGDR
ASPERRSLSRYSHHHSRIRSSLEQDWSRYHHLENEHAWVRERFYPDKLRWDKCRYYHDRY
TSLYTARDAREWRPLHGREHERLVQSGRPHKDSYWGRKGWELQSRGKERPHFHSPREAPG
LAMPLERHLQEKAALSVQDSSHSLPERFHEHESVKSRKRRYETLENNDGRLEKKVHKSLE
KDALEEPRVKKHKKSKKKKKSKDKHRDRDSRHQQESDFSGAYSDADLHRHRKKKKKKKRH
SRKSEDFIKDVEMHLPKLSSYEAVGHFRKTEGTFLLADSLPVEDSGPFREKTKHLRMESR
PDRCHLSEYGQGD
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaactgaaccttcagacccatcaacctgtcagaagcaacctggc
agttctgaggcggtctctcctgaagacatggacacaggctctgctagctggggtgctgtg
tcttctatgagtgatgtctcaaatcatacactttcattagggccagtgcctggtgctgta
gtttattctaattcgtctgtacctgaaaaatcaaaaccatcaccaccaaaggatcaagtc
ctaggtgatggcattgctcctcctcaaaaggtcctatttccatctgaaaagatttgtctt
aagtggcaacaaagtcaccgagttggcgctgggctccagaatttgggcaatacatgtttt
gccaatgctgcattgcagtgtctgacttatacaccacccctcgccaattacatgttatcc
catgaacactccaagacatgccacgcagaaggattttgtatgatgtgcacaatgcagacg
cacattacccaggcacttagcaaccctggggatgttatcaagccgatgttcgtcatcaat
gaaatgcggcgtatagctagacacttccgttttggaaaccaagaagatgcccatgaattt
cttcagtacacagttgatgccatgcagaaagcatgtttgaatggcagcaataaattagac
agacacacccaggccaccaccctggtctgccagatatttggaggctacctaagatcccga
gtaaaatgtttaaattgcaagggtgtttcagatacctttgatccatatctggacataaca
ttggagattaaggctgcacagagtgttaccaaggcattagagcagttcgtgaagccagaa
caactggatggagaaaactcctacaaatgtagcaagtgcaaaaaaatggttccagcttca
aagagattcaccattcatagatcctctaatgttcttaccatttcactgaagcgttttgcc
aactttaccggtggaaaaattgctaaggatgtgaaataccccgagtaccttgacattcgg
ccctatatgtctcagcccagtggagagccaattatttatgttttgtatgctgtgctggtg
cacactggttttaactgtcacgctggccactacttttgctacatcaaggctagcaatggc
ctctggtatcagatgaatgactccatcgtgtccaccagtgacattagagcggtgcttaac
cagcaagcttatgtgctcttttatatcaggtcccatgatgtgaaaaatggaggggaaccc
gctcatcctgcccatagccctggccagtcctctccccgcccaggaatcagtcagcgggta
gtcaacaacaaacaggcggcaccagggtttattgggccccagctgccttcccacgtgatg
aagaacacaccacacttgaatggcaccacaccagtgaaagacacaccaagtagttctgtg
tcaagccctaacggaaacaccagcgtcaatagggccagtcctgctacttcttcgacttct
gtgcagaactggtctgttagcaggccctcagttattccagaacaccccaagaaacaaaaa
attaccatcagtattcacaacaagttgcctgttcgccaaggtcaggcacagctgaataac
aacctccatggcacttgtctggaggcccctagcaaggcggcaccctcctccaccatcact
aacccttctgcaatacagtctacctcgaacgttcccgcgacgtcagtttctaataaagta
gcaaaatcagtttcccctagtgagtcctgttctaagcccatggtgaacggcaaggctaaa
gtgggctccagtgtgctcgtcccctatggggccgagtcctccgaagagtctgatgaggag
tcgaagggcctggccaaggagaacggtgtggacatgaaggccagtactcactccgatagg
ccagaagctgctgcagaggaggatgctgaggcttccccccatgagctccaagaacccgtc
atgctaaatggtgctaatagcgcagacagtgactcgagagagaacagcctggcatttgac
agtgccagctgccaggtccaaaccgagctacacacagaaaacctcttttccaaacttaat
ggtcttcctggcaaggtgacgcctgctcctttgcagtctgttcccgaagacagaatcctt
gagaccttcaagcttaccaaccaggcaaagggtccagtgggtgaagagagttggactaca
acaggaggaagctctccaaaggactctgtttcacagccggagcccgtcagtgatgagccc
agtcctcttgagataccggaagccgtcaccaatgggagcacgcagaccccttccaccatg
tcatccctggagcccaccatcagctgtaccaaagaagactcgtccgttgttgtctcagcc
gaacctgtggagggtttgccttctgtccctgctctttgtaacagcaccggtactaccttg
gaggatgccccagtgcccgaatcgtgtgaccctggagacttgactgccaacccgagccag
ccaacccaagcagtaaaaggtgatacagctgagaacgctcaggactccgccttggctgaa
gtggtagaaaggctgagccctgctccctcagtactcacaggtgacggctgtgagcagaaa
ctcttcctttacctcagcacagagggctcagaggaggcagaagactcttccagaagctcg
gcagtctctgctgacaccatgctccctcagcctgacaggaccaccaccagctcttgtgaa
ggggctgctgagcaggctgctggggatagaggcgatggaggcaacatgggacccaaagct
caggagccttccccagccaaggaaaagatgagcagccttcggaaagtggaccgaggacat
tatcggagccggagagaccggtcctccagtggggagcacgtgaaggacagcaggcctcga
ccggaggaccatcaccataagaagcggcactgctacagccgagagcggcccaagcaggaa
cgccaccctgctaataatacatactgcaatgggagccagcacctgggccatggtgacaga
gccagccctgagcgccgctctctgagcaggtacagccaccaccattcacggattaggagt
agcctggaacaggactggagccggtaccaccatttggaaaatgagcatgcctgggtcagg
gagaggttctacccggacaagctgcggtgggacaagtgcaggtattaccatgacaggtac
acatccctgtacacagctcgggacgcccgagagtggcggcctctgcatggtcgtgagcat
gaacgccttgtccagtctggacggccacacaaggacagctactggggccgcaagggctgg
gagctgcaatcccgggggaaggaacggccccacttccacagcccccgagaggcccccggc
cttgctatgcccctggagaggcatctccaagagaaggctgcgttgagtgtgcaggacagc
agccacagtctccctgagcgctttcatgaacacgagagtgtcaagtcgaggaaacggagg
tatgagactctagaaaataatgatggccgtctagaaaagaaagtccacaaaagcctggag
aaggacgcgctagaagagccaagggtgaagaagcacaaaaagtctaaaaagaaaaagaag
tccaaagataaacaccgggatcgagacagcaggcaccagcaagaatctgatttttcagga
gcatactctgatgctgacctccatagacaccggaagaaaaagaagaaaaagaaaaggcat
tcgaggaaatcggaggactttataaaagatgttgagatgcatttaccgaagctctcaagc
tatgaggctgttggccatttccggaaaacagagggaacctttctactagctgatagtctg
cctgtggaagacagcggccctttccgggagaaaacgaagcatttaaggatggaaagccgg
cctgacagatgccatctgtcagagtatggccagggtgactaa
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integrated database retrieval system
