Mastomys coucha (southern multimammate mouse): 116068744
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Entry
116068744 CDS
T07224
Symbol
Smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04120
Ubiquitin mediated proteolysis
mcoc04137
Mitophagy - animal
mcoc04144
Endocytosis
mcoc04340
Hedgehog signaling pathway
mcoc04350
TGF-beta signaling pathway
mcoc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116068744 (Smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116068744 (Smurf1)
04350 TGF-beta signaling pathway
116068744 (Smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116068744 (Smurf1)
04137 Mitophagy - animal
116068744 (Smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
116068744 (Smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116068744 (Smurf1)
04121 Ubiquitin system [BR:
mcoc04121
]
116068744 (Smurf1)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116068744 (Smurf1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116068744 (Smurf1)
Membrane trafficking [BR:
mcoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116068744 (Smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
116068744 (Smurf1)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
HECT type E3
116068744 (Smurf1)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116068744 (Smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
116068744
NCBI-ProteinID:
XP_031194555
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGGGGSVVDCRGLLENEGTVYEDSGPGRPLSCLMEEPA
PYTDGTGAAAGGGNCRFVESPSQDQRLLVQRLRNPEIRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLQLPSEGSVEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacccgtaggaacggctccagcatcaagatccgtctgacagtattg
tgtgccaagaaccttgcaaagaaagacttcttcagacttcccgacccctttgccaagatt
gttgtggacggctctgggcagtgccactcaaccgacactgtgaaaaacactttggaccca
aagtggaaccagcactatgacctgtacgttgggaaaactgactctataaccatcagtgtg
tggaaccacaagaagatccataagaagcagggggctggcttcctgggctgcgtgcggctg
ctctccaatgccatcagcagattgaaagatactggctaccagcgtttggatctatgcaaa
ctaaatccctcagatactgatgcagttcgtggccaaatagtggtcagtttacagactcga
gacagaataggcggtggagggtcagtggtggactgcagaggactgctggaaaacgaagga
accgtgtatgaagactcaggccctggaaggccgctcagctgcctcatggaggaaccggcc
ccatacacagatggtaccggtgcagcagcaggaggcgggaactgcaggtttgtggagtct
ccaagtcaagatcagagactcctggtacagcgactccgaaatcctgagattcgagggtcc
ctacagacgccccagaaccgaccccatggccaccagtcaccggagctgcctgaaggctat
gagcaaaggacaacagtgcagggacaagtttactttttgcacacgcagactggagtcagc
acgtggcatgaccccaggattcccagagaccttaacagtgtgaactgcgatgaacttggg
ccactgcctccaggctgggaagtcagaagcacagtgtcgggaagaatctattttgtagat
cacaataataggacaacccagtttacagatccacggcttcaccacatcatgaatcaccag
tgccaactcaaggagcccagccagccactgcagctgcccagtgagggctccgtggaggat
gaggagcttcctgcccagagatatgagagagatttagtccagaagcttaaagttctcagg
catgagctctctcttcagcagccccaggctggtcattgtcgcatagaagtttccagagaa
gaaatatttgaggagtcatatcgccagatcatgaagatgcggccaaaagacctgaagaag
cgcttgatggtgaagttccgaggggaggaaggtttagattatggtggagtggctcgggag
tggctgtatttgttgtgccatgaaatgttgaatccgtattatggactcttccagtattcc
acggacaatatttacacactacaaatcaaccctgattcttctatcaaccctgaccatctg
tcttacttccactttgtgggtcgcatcatgggtctggctgtgttccacggacactacata
aatgggggtttcacagttccgttctacaagcagctcctggggaaacccatccagctgtca
gacctggagtccgtggacccggaactgcacaagagcttggtgtggattctagagaatgac
atcacgcctgtgctggatcataccttctgcgtggagcacaatgcttttgggcggattctt
cagcatgaactgaaacccaatggcagaaatgtgcctgtcacagaggagaacaagaaggaa
tacgtccggttgtatgtgaactggaggtttatgagaggaatcgaagcccagttcttagcg
cttcagaaggggtttaatgaactcattccccaacacttactgaagccctttgaccagaag
gaactagagctgataataggtgggctggataagatagacctgaacgactggaagtccaac
actcggctgaagcactgtgtggcagacagcaacatcgtcaggtggttctggcaggcggtg
gagaccttcgatgaggaaaggagagccagactcctgcagtttgtgacaggatccacaaga
gttcctcttcaaggtttcaaggctctgcaaggctctacaggcgcggcagggccccgactg
ttcaccatccacctgatagacgccaatacagacaacctacccaaggcccatacctgcttt
aaccggatcgacatcccaccctatgagtcctatgagaagctctatgagaagctgctgaca
gccgtggaggagacctgtggctttgccgtggagtga
DBGET
integrated database retrieval system
