Mastomys coucha (southern multimammate mouse): 116068903
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Entry
116068903 CDS
T07224
Symbol
Col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04151
PI3K-Akt signaling pathway
mcoc04382
Cornified envelope formation
mcoc04510
Focal adhesion
mcoc04512
ECM-receptor interaction
mcoc04820
Cytoskeleton in muscle cells
mcoc04926
Relaxin signaling pathway
mcoc04933
AGE-RAGE signaling pathway in diabetic complications
mcoc04974
Protein digestion and absorption
mcoc05146
Amoebiasis
mcoc05165
Human papillomavirus infection
mcoc05200
Pathways in cancer
mcoc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116068903 (Col4a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116068903 (Col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116068903 (Col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116068903 (Col4a2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
116068903 (Col4a2)
09154 Digestive system
04974 Protein digestion and absorption
116068903 (Col4a2)
09158 Development and regeneration
04382 Cornified envelope formation
116068903 (Col4a2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116068903 (Col4a2)
09162 Cancer: specific types
05222 Small cell lung cancer
116068903 (Col4a2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116068903 (Col4a2)
09174 Infectious disease: parasitic
05146 Amoebiasis
116068903 (Col4a2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
116068903 (Col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcoc04147
]
116068903 (Col4a2)
00536 Glycosaminoglycan binding proteins [BR:
mcoc00536
]
116068903 (Col4a2)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
116068903 (Col4a2)
Glycosaminoglycan binding proteins [BR:
mcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116068903 (Col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
116068903
NCBI-ProteinID:
XP_031194886
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MDRVRYTASGPPLRGWLLLATVTVGLLAQSVLGGVKKLDVPCGGRDCSGGCQCYPEKGAR
GQPGAVGPQGYNGPPGLQGFPGLQGRKGDKGERGIPGPTGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSEGFPGLPGPQGPKGQKGEPYALSKEDRD
KYRGEPGEPGLVGYQGPPGRPGPIGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG
EKGDIGQPGPNGIPSDITLVGPTTTTYHPDLYKGEKGSKGEQGIPGIISKGEEGIMGFPG
IRGFPGLDGEKGVLGQKGSRGLDGFQGPSGPRGPKGERGEQGPPGPPVYSPHPSLAKGAR
GDPGFQGAHGEPGSRGEPGDPGPMGPPGPSVGDEDSKRGLPGEMGPKGFSGEPGLPASYP
GPPGADGKPGPQGVPGPAGPPGPDGYLFGLKGSEGRVGYPGPSGFPGARGQKGWKGEAGD
CQCGQVLGGLPGLPGPKGFPGVNGELGKKGDQGDPGLHGIPGFPGFKGAPGIAGAPGPKG
VKGDSRTITTKGERGQPGVPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDAGF
PGVPGTKGFPGEVGPPGQGLPGPKGERGFPGDAGLPGPPGFPGPPGPPGAPGLTDCDTGV
KRPIGGGQQVVVQPGCVEGPTGSPGQPGPPGPTGAKGVRGMPGFPGASGEQGLKGFPGDP
GREGFPGPPGFMGPRGSKGAPGLPGPDGSPGPIGLPGPAGPPGDRGIPGEVLGAQPGTRG
DAGLPGQPGLKGLPGELGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGLSGPPGQHGFPG
APGRQGPLGLPGSPGLGGLPGDRGEPGEPGVPGPVGMKGLSGDRGDAGMSGERGHPGSPG
FKGMAGMPGIPGQKGDRGSPGMDGFQGMLGLKGRPGFPGVKGEAGFFGVPGLKGLPGEPG
VKGNRGDRGPPGPPPLILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGVSGVPGL
PGRPGFIKGAKGDIGVPGSPGLPGFPGLSGPPGITGFPGFTGSRGEKGAPGVAGGFGETG
PTGDFGDIGDTVDLPGSPGLKGERGVTGIPGLKGFFGEKGAEGDVGFPGITGMAGAQGSP
GLKGQTGFPGLTGLQGPQGEPGRIGIPGDKGDFGWPGVPGLPGFPGIRGISGLHGLPGTK
GFPGSPGVDAHGDPGFPGPTGDRGDRGEANTLPGPVGAPGQKGERGTPGERGPAGSPGLQ
GFPGISPPSNISGSPGDVGAPGIFGLQGYQGPPGPPGPNALPGIKGDEGSSGAAGFPGQK
GWVGDPGPQGQPGVLGLPGEKGPKGEQGFMGNTGPSGVVGDRGPKGPKGDQGFPGAPGSM
GSPGIPGIPQKIAVQPGTIGPQGRRGLPGALGEIGPQGPPGDPGFRGAPGKAGPQGRGGV
SAVPGFRGDQGPMGHQGPVGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCP
VGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSY
WLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSF
LMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPEQNFQ
STPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagtgcggtacacagcgtctggccctccgctgcgagggtggctgctgctagcg
accgtgacagtgggactcctggctcagagcgtcttagggggtgtgaagaagttggatgtg
ccctgtggagggagagactgcagtggaggttgtcagtgctacccggagaaaggagcgcgg
ggtcagcctggggcagtgggcccccaggggtacaatggccccccagggttgcaaggattc
ccaggactacagggtcgcaaaggagacaagggcgaacggggaattcctggacctactgga
ccaaaaggagatgtgggagcgagaggcgtctctggattccccggtgcagatggaattcct
gggcacccaggccaaggtggaccccgaggacgaccaggctacgatggttgcaatggaacc
agaggagatgctggtccacaggggccctctggatctgagggcttccctggcctccctggg
ccccaaggacccaaggggcagaaaggcgaaccttatgcactctctaaagaagaccgtgac
aaataccggggtgaacctggagaacctggcctggtgggctaccaggggcctccgggccgc
ccagggccaataggacagatgggtcctgtgggagcgcctggaagaccgggaccaccggga
cccccggggcccaaaggacaaccaggcaaccgagggcttggtttttacggagagaagggt
gaaaagggtgacataggacagccaggacccaacgggatcccctctgacatcacacttgtt
gggcccacgacaacaacgtaccacccggatctgtacaagggtgaaaaaggaagtaaagga
gaacaagggatcccgggcataatctccaaaggcgaggaaggcatcatgggattcccagga
atacggggttttcctggccttgatggagaaaaaggagtcttaggacagaaaggaagcaga
ggcctggatggtttccaaggccccagtggacctcgaggacccaagggagaacgcggggag
caaggacccccaggaccccctgtctactcgccccatccatccctggcgaaaggtgccaga
ggtgacccaggattccaaggtgctcatggggagccaggaagccgaggcgagccgggagac
cctggacccatggggcctccaggcccatctgtgggagatgaagattcaaagagaggcctt
ccaggggagatgggacccaaaggcttctcaggagaaccaggcctcccagcgagctatcct
ggcccaccaggagctgatggaaaaccaggtccccaaggagtccctgggcctgcaggccca
cccggaccagatggctacctgtttggcctgaaagggtcggaagggagagtgggttaccca
ggaccttcaggtttcccaggagctcgagggcagaaaggatggaaaggtgaagctggagac
tgccagtgtggccaggtcctcgggggtcttccgggactgccgggacccaagggttttcct
ggggtcaatggggagcttggaaagaaaggcgaccaaggagacccaggtctgcacgggatc
cctgggttcccaggattcaagggagccccgggcatcgcaggagctcctggacccaaaggc
gtaaagggagactctagaacaatcactaccaaaggtgagcgtggacagccaggtgtccct
ggtgtacatgggatgaaaggtgatgacggtgtcccaggacgtgacgggttggatggattc
cctggcctgcctggtcctccgggcgatggcatcaaaggccctccaggggatgcaggtttc
cctggtgtacccggaaccaagggcttcccaggagaagtgggtcctccaggacaggggtta
ccaggcccgaaaggcgagcgtggtttccctggagatgctgggctgcctggaccgccaggc
ttccctggtcctccaggtcccccaggagccccaggactcacagattgtgacacaggtgta
aaaagacctattggaggcggccagcaagtggtcgttcagccaggttgtgttgaaggcccc
acaggctcacctggccagccaggacccccaggccccacaggtgccaaaggcgtcagagga
atgccaggattcccaggagcttccggagaacaagggctcaagggctttccaggagaccca
ggtcgagaaggcttcccagggcccccggggttcatgggaccccgaggatccaaaggtgcc
ccaggcctccctggtccagatggatccccaggtcccattggacttccagggccagctggg
ccccctggggacagagggattccaggagaagtgctaggggctcagcctgggacccgagga
gatgctggactaccggggcaacctgggctaaaagggctcccaggagaactaggagcccct
ggattcagaggaagccaagggatgcccgggatgccagggcttaaaggtcagccaggcttc
ccaggaccatcggggcagccagggctgtctgggcccccaggacaacatggattcccaggg
gctcctggccgacaggggcctttggggctgccaggctcccctggccttggaggtttgcct
ggagacaggggcgaacctggtgaacctggtgtccctggccctgtgggcatgaaaggtctg
tctggggacagaggtgacgccggtatgtcaggcgagcgtggccatcctggaagccctgga
tttaaaggaatggcagggatgcctggcatccctgggcagaaaggcgatcgagggtctcct
ggaatggatggcttccagggcatgctgggacttaagggaagacccggcttcccaggagtc
aaaggagaagctggattctttggagttcctggtttgaagggcctgcccggcgagccaggt
gttaaaggaaaccgaggggaccggggccccccaggaccacctcctctcatcctgccgggg
atgaaggacatcaagggagaaaagggagatgaagggccaatgggtttgaaaggctacctg
ggcttaaaaggcatccaaggaatgcctggggtcccaggggtgtctggagtccctgggcta
cccggaaggcctggcttcatcaaaggagccaagggagacatcggagtccctggctcacca
ggcttgccaggatttcccgggttgtctggccctcctggaattactgggttcccaggattc
acaggaagccggggcgagaagggtgctccaggagtagcagggggttttggcgagacaggc
cctacaggggactttggtgatatcggtgacactgtggacttaccgggaagcccaggcctg
aagggggaacggggagtcacgggaattccaggtctcaagggattctttggggagaaagga
gctgagggtgacgttggatttcctgggataacaggcatggccggagctcagggctctcct
ggacttaaaggacagacaggctttccagggctcacagggctgcaagggccacagggagag
cccggacggattggaatacccggtgacaagggtgacttcggttggccaggcgtaccaggt
ctaccaggttttccaggaatccgagggatcagcgggttgcacggcttgcctggcaccaaa
ggcttccctggatccccaggtgttgatgcccatggagacccagggttcccaggccccact
ggagacaggggtgaccggggagaggccaacacacttccgggccctgtgggagctccagga
cagaaaggggaacggggaaccccaggggaacgtggcccagctggaagcccaggacttcag
ggtttccctggtatctctccaccatccaacatctctgggtcacctggtgatgtaggggca
ccaggaatatttggcttgcaaggctaccaaggccctccaggaccacctgggccaaatgca
cttcctgggatcaaaggagatgaggggagctccggagctgcaggattccctggacagaaa
ggatgggttggggacccaggcccacaaggccagcctggtgtgctcggtcttccaggggag
aaagggcccaagggtgagcaaggattcatgggcaacaccgggccctctggggtcgtgggt
gacagaggccccaaaggacccaagggtgaccaaggattcccaggtgctccaggctccatg
ggatccccaggcattcctggtatcccccagaagattgctgtccagcctgggaccataggt
ccccagggcaggagaggccttcctggtgccctgggagagatagggcctcagggccctcct
ggagatccaggtttccgtggggcccccggcaaggctgggccccagggcagaggtggcgtg
tctgctgttccagggttccggggagaccaagggcccatgggacaccagggtccagttggc
caggaaggggagccaggccgtccagggagtccaggcctgccagggatgccaggccgcagt
gtgagcatcggctaccttctggtgaagcacagccagacggaccaggaacctatgtgcccc
gtgggcatgaacaagctctggagtgggtacagcctgctgtatttcgagggccaggaaaag
gcacacaaccaggacctagggctggcaggctcctgcctggcacgcttcagcaccatgcct
ttcctgtactgcaatcccggggacgtctgctactatgccagccgcaatgacaagtcctac
tggctctccaccacggcccctctgcccatgatgcctgtggctgaggaggaaatcaagccc
tacatcagccgctgctctgtgtgcgaggctccggccgtggccattgccgtccacagccaa
gatgtctctataccccactgcccggctgggtggcggagtttgtggatcggatattcattc
ctcatgcacactgcagctggggacgaaggcggtggccagtcactggtgtcaccgggcagc
tgtctggaggacttccgtgcaacgccgtttatcgagtgtaatgggggccgtggtacctgc
cactacttcgctaacaagtacagcttctggctgaccacaatccctgagcagaacttccag
agcacaccatccgccgacacgctcaaggctggcctcatccgcacacacatcagccgctgc
caagtgtgcatgaagaacctgtga
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integrated database retrieval system
