Mastomys coucha (southern multimammate mouse): 116068917
Help
Entry
116068917 CDS
T07224
Symbol
Sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116068917 (Sox1)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116068917 (Sox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116068917
NCBI-ProteinID:
XP_031194935
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGTKANQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGYA
HVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHN
PQPMHRYDMGALQYSPISNSQGYMSASPSGYGGIPYGAAAAAAAAAGGAHQNSAVAAAAA
AAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAA
AAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcgcccacg
aacctctcgggcccggccggggcgggcgggggcggcggcgggggcgggggcggcggcggg
ggcaccaaggccaaccaggatcgggtcaagcggcccatgaacgccttcatggtgtggtcc
cgcggacagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagc
aagcgcctgggggccgagtggaaggtcatgtccgaggcggagaagcggccgttcatcgac
gaggccaagagactgcgcgcgctgcacatgaaggagcacccggattacaagtaccggccg
cgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctgctg
gcggccggcgcgggcggcggcggcgcggccgtggccatgggcgtgggcgtgggcgtcggg
gcggcggccgtgggccagcgcctggagagcccgggcggcgcggcgggaggaggctacgcg
cacgtcaacggctgggctaacggcgcctacccgggctcggtggccgcggcggccgcggcc
gcggccatgatgcaggaggcacagctggcttacgggcagcatcccggcgcgggtggcgcg
cacccgcacgcgcacccggcgcacccgcacccgcaccatccgcacgcgcatcctcacaac
ccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatctccaactct
cagggctacatgagcgcgtcgccctcgggctacggcggcatcccttacggggccgcggcc
gccgccgccgccgccgcgggcggcgcgcaccagaactcggcggtggcggcggcggcggcg
gcggcggccgcgtcgtcgggggccctgggcgccctgggttctctggtcaagtcggagccg
agcggcagcccgcccgccccggctcactcgcgggcgccgtgcccgggggacctgcgcgag
atgatcagcatgtacctgcccgccggcgagggtggcgacccggcggcggccgccgcggcc
gcggcccagagccggctgcactcgctgccacagcactaccagggcgcgggcgcgggcgtc
aacggcacggtgcccctgacgcacatctag
DBGET
integrated database retrieval system
