KEGG   Mastomys coucha (southern multimammate mouse): 116069575
Entry
116069575         CDS       T07224                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116069575 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcoc03041]
    116069575 (Sf3a1)
Spliceosome [BR:mcoc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116069575 (Sf3a1)
 Complex B
    116069575 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    116069575 (Sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 116069575
NCBI-ProteinID: XP_031196191
LinkDB
Position
Unknown
AA seq 791 aa
MQAGPVQAVPPPPPVATESKQPIEEEVSSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFSKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDQEKTEETPSQLDQDTQVQDMDEGSDDE
EEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPA
SKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEET
AIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDTK
EKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRPPM
ASVVRLPPGSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAPVP
APAPMPPVHPPPPMEDEPPSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEWKL
NGQGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAVIH
LALKERGGRKK
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgcaggccggacccgtgcaggcggtacccccaccgccgccagtagccactgagtccaaa
cagccaattgaagaagaagtatcatcaaaggaggattccaccccttccaagccagtggta
gggattatttaccctcctccagaggtcaggaatatcgtcgacaagactgccagttttgtg
gccagaaatggacctgaatttgaagctaggattcgacagaatgagatcaacaaccccaag
ttcaatttcttaaatcccaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaggctcaggaaccctcagctgctatccccaaggttatgcagcagcag
cagcaagccacacaacagcagctgccccagaaggtccaagcccaggtgatccaagagacc
atagtaccgaaggagccccctcctgagtttgagttcatcgctgatcccccctccatctca
gccttcgacctggacgtagtgaagctgacagctcagtttgtagccaggaatggacgccag
tttctgacccagctgatgcagaaagaacagcgcaactaccagtttgactttctccgaccc
cagcacagcctcttcaactacttcacaaagctggtggagcagtacaccaagatcttgatt
ccacccaaaggcttattttcaaaactcaagaaagaggctgaaaatccccgagaagttttg
gaccaggtttgttaccgagtagaatgggccaaatttcaggaacgtgagaggaagaaggaa
gaagaggagaaagaaaaggagcgagtagcctatgctcagattgattggcatgattttgtg
gtggtggagacagtggattttcaacccaatgagcaaggaaactttccacctccaacaaca
ccagaggaactgggagctcggatccttattcaggagcgctacgagaagtttggggagagt
gaggaagtagagatggaggttgagtcagatgaggaagatcaagaaaagactgaggagact
ccttcccagctggaccaggatactcaagtgcaggacatggatgagggttcagacgatgaa
gaagaaggacagaaagtgcctccacccccagagacacccatgcctccacctctgccccca
acaccagaccaagtcattgtgcgaaaggactatgatcccaaagcttccaagccccttcct
ccagctcctgctcctgatgagtatcttgtatcccccatcactggggagaagattcctgcc
agcaaaatgcaagaacacatgcgcattgggcttcttgacccccgctggctagagcagcgg
gaccgctccatccgagagaaacagagcgatgatgaagtttatgcaccaggtctggatatt
gagagcagtttaaagcagttggctgagcggcgtactgacatctttggagttgaagagaca
gccattggaaagaagattggtgaagaggagatccagaagccagaggaaaaggtgacttgg
gatggccattcaggcagcatggcccgaacccagcaggctgcccaggccaacatcaccctc
caggagcagattgaggccatccataaggccaagggcctggtgccagaagacgacactaag
gagaagattggccctagcaagcccaatgaaatccctcagcagccaccacctccatcttca
gccaccaatatccccagctcagcaccccccatcacatcagtgccccggccacctgcgatg
ccacctccagtccgcaccactgttgtatctgcagtgcctgttatgcctcggccacccatg
gcatctgtggtccggctgcccccaggctcagtgattgcccctatgccacccatcatccac
gcacccaggatcaacgtggtacctatgcctcctgcagcacctcccatcatggcgccccgc
ccacctcccatgattgtgccaacagcctttgtgcctgccccgcctgtggctccagtccca
gccccagctccaatgcctcctgtacatcccccacctcctatggaagatgagcctccatcc
aagaaactaaagaccgaagacagcctcatgcctgaggaagagttcctgcgcaggaacaag
ggtccagtatccatcaaagtgcaggtacccaacatgcaggataagacggaatggaagctg
aatggtcaggggctggtcttcactctcccactcactgaccaggtctctgtcatcaaagtg
aagattcatgaagccacaggcatgcctgcagggaaacagaaactacagtatgaaggcatc
ttcatcaaggattccaactccctggcttactacaacatggccagtggtgctgtcatccac
ttggccctcaaggagagaggcggcaggaagaagtag

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