Mastomys coucha (southern multimammate mouse): 116069646
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Entry
116069646 CDS
T07224
Symbol
Usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116069646 (Usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116069646 (Usp38)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116069646 (Usp38)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116069646 (Usp38)
Ubiquitin system [BR:
mcoc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116069646 (Usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
HPF1
Motif
Other DBs
NCBI-GeneID:
116069646
NCBI-ProteinID:
XP_031196302
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MDKILEGLVSSSHPLPLKRMIVRKVVESAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQV
GHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSV
LDLFSLLQVEVLRMVCERPEPLLCARLSDLLTDFVQCVPKGKLSITFCQQLVRTIGHFQC
VSTQEKELREYVSQVTKVSNLLQNIWKAEPSTLLPSLQEVFASISSTDASFEPSVALASL
VQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHVIVPHIVNLVH
SFRSDGLPSSTAFLVQLTELVHCMMYHYSGFPDLYEPILEAVKDFPKPSEEKIKLILNQS
AWTSQSNALASCLSRLSGKSETGKTGLINLGNTCYMNSVLQALFMATEFRRQVLSLNLNG
CNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEE
KILRVQSSHKPSEGLGCAEPCLQEVTSKVESPGTGDSEKTLIEKMFGGKLRTHICCLNCG
STSHKVEAFTDLSLAFCPSPSVEDLSFQDPAPLPNTQDDGLMQTSVTDLEEEPIVYNPAT
AAFVCDSVANQRLSGSPPVEFHRDENSSVPEESPKILTSKDGAQNPGGESTTSVTDLLNY
FLAPEVLTGENQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNV
SLPLVLELPVKRTASFSSLSQSWSVDVDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSS
VVVHSGVSSESGHYYSYARNITGTESSYQMCPQSENLSLTPSQSCLLGGESPNTVIDQDL
ENKEMSQEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQSRANGVRSDNPASGV
WVNGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASTSCSFRPNGFDDNDPPGSCG
PTGGGGGGGFNTVGRLVF
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattctggagggcctggtgagttcctcgcacccgctgcccctcaagcggatg
attgtgcggaaggtggtggaatccgcggagcattggctcgacgaggcgcaatgcgaggcc
atgtttgacctgacgacccgcctcatcctggagggccaggaccctttccagcgacaagtg
ggccaccaggtgctggaggcctacgcccggtaccatcggccagagttcgagtccttcttc
aacaagactttcgtgttgggcctccttcagcagggctaccactcactggacagaaaagac
gtagccatcctggactacattcacaacggcctgaagctgattatgagctgcccgtcggtg
ctggatctcttcagcctgttacaggtggaagtcctgcgaatggtttgcgagaggccggag
ccactgctctgtgcccggctgagcgacctgctgaccgatttcgtgcagtgcgtccccaaa
gggaaactgtcaattaccttctgtcaacagctggttcgaactataggtcatttccagtgc
gtatccactcaggagaaggagctacgggagtatgtctcccaggtaacaaaagtgagtaac
ttactacagaatatttggaaggctgaaccctccacgctgctgccttctctgcaagaagtt
tttgcaagcatctcttccacagatgcatcctttgagccctcggttgccttggcaagcctg
gtgcagcatattcctctgcagatgatcacagtcctcatcaggagcctgaccacggaccca
aacgtaaaagatgcaagtatgacccaagctctctgcaggatgattgactggctgtcctgg
ccattggctcagcatgtggatacgtgggtaattgctctgctgaaaggactggcagctgtt
cagaagtttactattttgatagatgttactttgctgaaaatagaactggtttttaatcga
ctttggtttcctcttgtgagacctggtgctcttgcagtcctctctcatatgctgctcagt
tttcagcattctccagaggcattccatgtgattgtccctcatatagttaacttggttcac
tccttcagaagtgatggcctgccttccagcacagccttcttagtgcagctaacagagttg
gttcactgtatgatgtaccattattctggatttccagatctctatgagcctattctggag
gcagtaaaggattttcctaagcccagtgaagagaagattaagttgattctcaatcaaagt
gcctggacttctcaatccaatgctttggcatcttgcttgtctagactttctggaaaatct
gaaactgggaaaactggtcttattaacctgggaaacacatgttacatgaacagtgtttta
caagcattgtttatggctacagagttcagaagacaagtattatctttaaatctaaatggg
tgtaattctttaatgaaaaaattacaacatctttttgcttttttggctcatacgcaaagg
gaagcatacgcacctcggatattttttgaggcttccaggcccccgtggtttactcccagg
tcacaacaggactgctctgagtacctcaggtttctgctggacagactccatgaagaagaa
aagatcttgcgagttcagtcctcacataagccttctgaaggtctgggctgtgctgaaccg
tgtttacaagaagtaaccagtaaggtagagtctcctggtacaggggacagtgagaagact
ctaatagagaagatgtttggagggaagctacggactcacatctgctgcctgaactgcggg
agtacctcacacaaagtagaagccttcacagatctttccctagccttttgtcctagccct
tctgtggaagacctgtctttccaagatccagctccattacccaatacgcaagatgatggg
ctaatgcaaaccagtgtcactgacctggaagaagagccaatagtttataatccagcaaca
gctgcctttgtctgtgactcagttgcgaatcaaagactatcaggcagtcctcctgttgag
tttcaccgtgatgaaaactcttctgtccctgaagaatctccaaagattcttaccagtaaa
gatggagctcagaacccaggaggtgaaagcacaacttcagtgactgacttactaaactac
tttctggctccagaggttcttactggtgagaaccaatactactgtgaaaactgtgcctct
ctacagaatgcagagaaaactatgcaaatcacggaggagcctgagtaccttatccttacg
ctcctgagattctcctatgatcagaagtaccatgtgagaagaaaaattttagacaatgtg
tcactgcctctggttttggagttgccagttaaaagaactgcttccttctcttccttgtca
cagagttggtctgtagatgttgacttcactgatattaatgagaacctacctaaaaaatta
aaaccatctgggactgaagaagctttctgtcccaaattagtgccctacctattaagttct
gttgttgtgcactctggtgtgtcctctgagagtggccattactattcttatgccagaaac
atcacaggtacagagtcttcgtaccagatgtgcccccagtctgaaaatctgtcattaaca
ccctcccagagttgtttactagggggagaaagccccaatacagtcattgaccaggacttg
gaaaataaggaaatgtcacaagagtggtttttatttaatgacagcagggtgacatttact
tcatttcagtcagttcagaaaatcacaagtaggtttccaaaagacacagcttatgtgctt
ttgtacaaaaaacaaagcagagctaatggcgtacgcagtgacaatccagccagtggcgtc
tgggtcaatggagatccacccctacagaaagagctgatggatgccataacaaaggacaac
aaactgtatttgcaggaacaagaattgaatgctcgagcccgggctctacaagctgcatct
acttcatgttcatttcggcccaatggatttgacgacaatgatccaccaggaagctgtggg
ccaactggtggagggggtggagggggatttaatacagttggcagactcgtattttga
DBGET
integrated database retrieval system
