Mastomys coucha (southern multimammate mouse): 116069760
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Entry
116069760 CDS
T07224
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116069760 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116069760 (Vps35)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116069760 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
CENP-O
Imm5
ADIP
Motif
Other DBs
NCBI-GeneID:
116069760
NCBI-ProteinID:
XP_031196504
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSQMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRSR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcaccccaggatgagcaggaaaaactcttggatgaagctatc
caggctgtgaaggttcaatcattccagatgaaaagatgcctggacaaaaacaagctgatg
gatgctctgaaacatgcctctaatatgcttggagaactccggacttctatgctatcaccg
aagagttactatgaactttatatggctatttctgatgaactgcactacttggaggtctac
ttgactgatgaatttgctaaaggaagaaaggtggcagatctctatgaacttgtacagtat
gctggaaacattattccaaggctttatctcttgatcacagttggagttgtatatgtcaag
tcatttcctcaatccaggaaagatattttgaaagatttggtagaaatgtgtcgtggtgtg
cagcatccactaaggggtttgtttcttcgaaattaccttctccagtgtactaggaacatt
ttacctgatgaaggagagccaacagatgaagaaacaactggtgatatcagtgattccatg
gattttgtactactcaactttgcagaaatgaataagctctgggttcggatgcagcatcaa
ggacatagtcgagatagagaaaaaagagaacgagagagacaagaactgagaattttagtg
ggaacaaatttggtgcgccttagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgtcttaacaggcattttggagcaagttgtgaattgtagagatgctttggctcaagaa
tatctcatggagtgtatcattcaggtttttcctgatgagttccatctccagactttgaat
ccttttcttagagcttgtgctgaattacaccaaaacgtaaatgtgaaaaacataatcatt
gctttaattgacagattagctttatttgctcatcgtgaagatggacctggaattccagct
gagattaaactttttgacatattttcacaacaggtggctacagtgatacagtccagacaa
gacatgccatcagaagatgttgtatctttacaagtctctctcattaatcttgctatgaaa
tgttaccctgatcgtgtggactacgttgataaagttctagaaacaacagtggagatattc
aataagcttaaccttgaacatattgctaccagtagtgcagtttcgaaggagcttaccaga
cttttgaagatacctgttgatacttacaacaatatcttaacagtcttaaaattaaagcat
ttccacccactttttgaatactttgactacgaatccagaaagagcatgagctgttatgtg
cttagtaatgttctggattataacacagaaatcgtctctcaggaccaggtagattccata
atgaatttggtgtccacattgattcaggatcagccagaccaacctgtagaagaccctgat
ccagaagactttgctgatgaacagagccttgttggccgatttattcatcttctacgatct
gatgatcctgatcagcagtacttgattttgaatacagcacgaaaacattttggggctggt
ggaaaccagcggatccgcttcacactgccacctttggtatttgcagcttaccagttggct
tttcgatacaaagagaattctcaaatggatgacaagtgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactattagtgctttgattaaagctgagctggctgaattgcca
ctgagactttttcttcaaggagcgttagctgctggagaaattggctttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctgtatgaagatgaaatcagtgat
tctaaagcacagctggctgctatcaccttgatcattggtacttttgagaggatgaaatgc
ttcagtgaagagaatcatgagcccttgaggactcagtgtgcacttgctgcatcaaaactt
ctgaaaaaaccagatcaaggccgagctgtgagcacatgtgcacatctcttttggtctggc
agaaacacagacaaaaatggggaagagcttcatggaggtaaaagagtcatggagtgccta
aagaaggcactaaaaatagcaaatcagtgcatggacccctctctacaagttcagctcttt
atagagattctgaacagatacatctatttctatgaaaaagaaaatgatgcggtaacaatt
caggtcttgaaccaacttattcaaaagattcgagaagatctcccaaatcttgagtccagt
gaagaaacagaacaaattaataagcattttcacaacacattggagcacttgcgctcaaga
cgggaatcaccagaatctgaggggccaatctatgaaggtctcatcctttaa
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