Mastomys coucha (southern multimammate mouse): 116069843
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Entry
116069843 CDS
T07224
Symbol
Chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116069843 (Chd9)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116069843 (Chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
116069843
NCBI-ProteinID:
XP_031196678
LinkDB
All DBs
Position
Unknown
AA seq
2880 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMADFEQLNQFDSMKFHQVNQSFGSPVEHVLSPHSQFNCSPIHPPNQPNGLFQDVAD
GSPMWGHQTATGLANQNGSPFHQQGHSHSLHQNKSFVAHHDFALFQASEHQTQCSSLRSQ
QNRSNLNPGQNSLGQAKNFLDANVSGTHRVNVNHLATAPSSQQTLPVQFSPTANPPAHFL
KCSSHQEGNYNRPSPSMTPCSVSNSQQFPAHYSFSSGHVSPSSLLQSSAGLAPSHTNQAL
SDFAGGNSFSPHRGMKQEPTQHLLNPTPSLNSNSFQILHPSHPQGNYSNSKLSPVHMNFP
DPVDSGPPMGHFNDHVETNGFSSLEENLLHQVESHAEPFAGLDPEDLLQEGLLPQFDESP
FGQDNSNHVLDHDLDRQFTSHLLSRPSDMAQTQLQYQARGWPSPLSNNHQHLHNRNHLCL
QRQPPSSKKSDGSGTYTKLQNTQVRVMSEKKPRKKVESESKQEKANRIISEAIARAKERG
ERNIPRVMSPENFPSASVEGKEEKRGRRMKSKPKDRDNKKSKPCSKLKEKTKIGKLIITL
GKKHKRRNESSDELSDAEQRSQHTFKEQHSQKRRSNRQIKRKKYAEDGEGKQSEEEVKGS
LRVKRNSAPAPGEQPLQLFVENPSEEDAAIVDKILACRIVKKEVSPGVMLDIEEFFVKYK
NYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVEVDRILEV
SFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLERPP
SNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYE
ILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGR
IIRGAYRFQAIITTFEMILGGCGELNTIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHK
VLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRR
LKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELR
KCCNHPYLIKGAEEKILGEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKV
LIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRAS
LKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQ
ILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDTISGRN
SLVIDTPRIRKQTRPFSATKDELAELSEAESEGEEKPKLRRPCDRSGGYGRTECFRVEKN
LLVYGWGRWREILSHGRFKRQLNEHDVEVICRALLAYCLVHYRGDEKIKGFIWDLITPTE
DGQTRELQNHLGLSAPVPRGRKGKKVKTQPSSFDIQKAEWLRKYNPEQLLQDEGYKKHVK
HHCNKVLLRVRMLYYLKQEVIGNESQKVFDGVDASDIDVWVPEPDHSEVPAAWWDFDADK
SLLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAP
AIFKDDIEDDVSSPGDLVIADGEGQLMEGDKVYWPTPSALTTRLRRLITAYQRTNKNRYV
QQIQPTFSVPANVMQPLYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDR
GQFDWTKFRALARLHKKTDNSLEKYLCAFMSMCRRVCRLPSKEELVDPNIFIQPITEERA
SRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPIWWECGSHDRDLLIGAAKHGVSR
TDYHILRDPELSFMAAQRNYSQSKAAHSRTSTPLLQQYQVALSASPLTSLPRLLGAKGTL
LEDPKVKSESLAEEPQSSEEESMSSVETRTRVKSEPVSPKNGVLSQATGDQKSGGKSETD
RRMVAARTEPLTPNPASKKQRVHKRGPESSSDSDSDSEHSSCSSRSSSSSSSSSCSHSRS
GSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEDVQKREGTPHVKAYDEESVAS
LSTTQDETQDSFQANNGTAESASYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRHYDANTVASFYTTKLLDSPGAATEHSEPSVPTPPAVAVKEEHEQSTQMSKVKKHVR
EKEFTVKIKDEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTRLRELQSTSETSLVNLP
KSMSASGTSIQSTLGANGAILDSQPIVKKRRGRRRNVEGADILFLNRNKPPNHISTGINP
AVPCPQPQRIPDTESPVPVINLKDGTRLAGDDAPKRKDLDRWLKEHPGYVEDLGAFIPRV
QLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKEN
AEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKATVAAAAPAG
SVPGNPLLANGLLPGVDLTALQALQQNLQNLQSLQVTAGLMGMPGGETKNMAAMFPMLFS
GMAGLPNLLGMGGLLSKTAESGAEEKRGNDSKELEGEKERTESQSSENGGERWVPGSPST
SSAAALSSAAAAKPIALNPLLLSNILYPGMLLTPGLNLHLPTLSQSNTFDVQKNKGSDLN
SSKSVEIKEEDSRVRDQEEKGGTEPSSLHENSTDEGSERASSGSESSSSSSEDSDSSNED
NT seq
8643 nt
NT seq
+upstream
nt +downstream
nt
atgacagacccaatgatggacttctttgatgatgctaatctttttggtgagactttagaa
ggcttgtcagatgatgcgtttgtacaaccgggacctgtctcactagttgacgaattgaat
ttgggtgcagagtttgagcctttgcacatagactcactaaaccatgttcaaggtactcca
acacatcagaagatggcggatttcgaacagttaaatcaatttgactcaatgaagtttcat
caagttaatcaatcttttggcagcccagttgaacacgtattatctccacattctcaattt
aattgctctccaatccatcccccaaaccaacccaatggcttgtttcaagatgtagcagat
gggagtccaatgtggggtcaccagacagctactggcttagctaatcaaaatggatccccc
tttcatcaacaaggacattcacactctctacatcaaaataaaagctttgtggcgcaccat
gattttgccttatttcaggccagtgaacatcaaacacagtgttcttcccttcgctcacaa
caaaacagaagtaaccttaacccagggcaaaactctcttggccaggctaaaaattttcta
gacgctaatgtttccggcacacacagagttaatgttaaccacctagccaccgccccatcc
tcgcagcagactctacctgtgcagttttctccgactgcaaaccctcctgcacacttcctc
aagtgcagcagtcaccaggaaggcaactataacagaccttctccaagtatgactccctgc
tctgtgagtaactcgcaacagttccctgcacactattccttctccagtggtcacgtgtca
ccaagcagtctcctccagtcatctgcaggtctcgcccccagtcatacaaaccaggctcta
tctgattttgctggaggtaactccttttcgcctcataggggaatgaagcaagagcccaca
cagcatctcctgaaccccactccatcactgaattcaaatagttttcaaattttgcatccg
tcacatcctcagggtaattatagcaactcaaaattatcacccgtgcacatgaacttccca
gatcctgttgactcaggacctccaatgggtcatttcaatgaccatgtggaaactaatgga
ttttcatctttagaagagaatttacttcatcaagtggaatctcatgcagaaccatttgca
ggacttgacccagaagacctcctgcaggagggtctcctcccccaatttgacgaatcacca
tttggacaagataattcaaatcatgttttagatcatgaccttgatcgccagttcacttca
catcttctatcgaggccttctgacatggctcaaactcagctgcagtatcaggctcggggc
tggccttccccactgtctaacaaccatcaacatttacacaacagaaatcatctgtgttta
cagcgacagcctccatcttccaagaagagtgatggttctgggacatacactaagctgcag
aatacccaggtgagggtcatgtctgagaagaagccaagaaaaaaggtggaatcagaaagc
aagcaagaaaaggctaatcgtataatatcagaggccatagcaagagcaaaggagcgaggg
gaacgtaatattccacgagtaatgagccccgagaactttcctagtgcttcagtcgaaggg
aaagaagaaaagagaggtcggaggatgaaatctaagccgaaagacagagacaacaaaaaa
tcaaaaccgtgttctaagttgaaagagaagacaaaaattggcaaactcattattacattg
ggtaagaaacacaagagaaggaacgagtcctcagatgagctgtccgatgcagagcagagg
tcccagcacacgttcaaagagcaacactctcaaaaaagaagatcaaatcgacaaattaag
aggaaaaaatatgcagaagatggagaagggaagcaatctgaggaagaggtgaaaggcagt
ctgagagtgaagaggaactcagctccagcacctggagagcaacctctgcagctgttcgtg
gaaaatccaagtgaagaagatgctgcaattgtagacaaaatactagcctgtaggattgta
aaaaaggaagtatcacctggagttatgcttgatatagaagaattttttgtaaagtacaaa
aattactcttatctccactgtgaatgggccacggaacagcagcttttgaaagataaaaga
atccagcagaaaatcaagcgattcaagctaagacaagcacagagggcacattttttggca
gacatggaagaagaaccctttaaccctgactacgttgaagtagacagaatattggaagtt
tctttttgtgaagataaggatactggtgagtctgttatttactacttagtaaagtggtgc
tcactgccgtatgaagacagtacctgggaactaaaagaagatgtagatcttgcaaaaatt
gaagagtttgaacaactgcaagcttcacggcctgacacaagacacttggaacgtcctccc
tctaatatttggaagaaaatagatcaatccagggaatataaaaatggcaatcaactcagg
gaatatcaactagaaggactcaactggctcctgttcaattggtacaatagacgaaactgc
attttagcagatgaaatgggccttggcaaaaccattcagtcaattacattcctctacgaa
atcctcctgacgggtataagaggacctttcctgattatcgcaccgctttctaccattgca
aactgggagagagaattccgtacgtggactgatattaatgttgtcgtctatcacgggagc
ctgattagcagacagatgatacagcaatatgagatgtacttcagggattctcaggggcgc
atcatccgaggagcataccgattccaagccatcatcactacttttgaaatgattcttggg
ggctgtggagaacttaatacaattgactggcgatgcgtgattattgatgaagcacacagg
ttaaaaaataaaaattgtaaactcctggagggtttgaaactcatgaatctggaacacaag
gtgctcctgactggcactcctctccaaaatactgtcgaggagctgttcagccttcttcac
tttcttgagcccttaaggtttccatcagaatcaacattcatgcaagagtttggagacctg
aaaacagaggaacaggtacagaaacttcaggctatccttaaaccaatgatgctgagacga
ttaaaagaagatgtggagaagaaattggcacccaaggaagagactattattgaagtagag
cttaccaacattcaaaagaaatactatagggctattttagagaagaacttctcgttttta
tccaaaggagctggacaaactaatgtccctaacttggtcaataccatgatggagctcagg
aaatgctgcaatcatccatatcttatcaaaggtgctgaggagaaaatacttggagaattt
agagatacatacaatccatctgcctctgattttcatctgcaagcaatgatccaatctgct
ggtaaactggtcctcattgataagttacttcccaaaatgaaagcaggcggccataaagtg
cttatcttctctcagatggttcgctgccttgacatcctggaagactatcttatccacaag
agatatttatatgagcggattgatggtagagtcagagggaatcttcgacaagcagccata
gatcggtttagcaaacctgactcggatcgcttcgttttcctcctgtgtacccgagctgga
ggtctaggcatcaacctgactgcagccgatacatgcatcatttttgattctgattggaat
cctcaaaatgacctccaggcccaagctcgttgccacagaattggtcagaacaaagcagtt
aaagtctacagattagtaactcgtaactcctatgagagagagatgtttgaccgagccagc
ttgaaactgggcctagataaagccgtgttacagagcatgagcggaagagacagtaatgtc
agtggtattcagcagctttccaaaaaagaaatagaagacctgctccgaagaggtgcatat
ggggccattatggaggaggaagatgaaggctctaagttctgtgaagaagatatcgaccag
attttactccgccgtacaaaaactattacaattgaatcagaaggacgtgggtcaacattt
gctaaggcaagttttgtagcctctggaaatcggacagacatttccttagatgatcccaac
ttctggcaaaaatgggctaagaaagcagaactagatatagacaccatcagtggcagaaac
agtttagttattgacaccccaagaattcggaagcaaaccagaccctttagtgccacaaaa
gatgaattggctgaattatctgaagctgaaagtgaaggagaagaaaaacccaaactccgg
agaccctgtgaccggtccggtggctacggaaggaccgaatgctttagagtggagaaaaac
ctactggtttatgggtggggccgatggagagagatcctgtctcacgggcggtttaagcgg
cagctgaatgagcacgatgtggaagtcatttgccgggccctcttagcctactgcctcgtt
cactatcggggcgatgagaaaattaaaggtttcatatgggatctcatcactcccactgaa
gatggccagactcgtgagctgcagaaccacttaggcctctccgctcccgtgcccaggggc
cgaaaggggaagaaagtgaagactcagccaagctcctttgatatccagaaagcagagtgg
ctgcggaaatataacccagagcagctcctgcaggacgagggctacaagaaacacgtgaag
caccactgcaacaaagtcctgcttcgtgtaaggatgctgtactatctaaagcaagaagtc
attggaaatgagagtcaaaaagtctttgatggagttgatgcaagtgacattgatgtttgg
gtgccagagccagaccattccgaggttcctgctgcgtggtgggactttgatgctgataag
tctcttcttattggggtttttaagcacggttatgagaaatataacacgatccgagcagac
ccagcactgtgcttcttggaaagagtgggcaagcctgatgacaaggctgtcgctgctgag
cagagggccaacgactacatggacggggatgtggaagatccagaatacaagcctgcccca
gcgatctttaaagatgacatagaggatgacgtttcctcacctggagatctggtcatagct
gatggagagggtcaattgatggaaggggataaagtgtattggcctaccccgtcagctctg
accacacggctgagacgtctcatcactgcatatcagcgaactaataaaaacagatacgtc
cagcagatacagcccaccttctcagtgcctgccaatgtcatgcagcctctttacgaagaa
gccgccctgaatcctaaaatggctgccaagatcgaaagacagcagaggtggacaaggaga
gaagaagctgacttctatcgagttgtgtctacatttggagtagtttttgacccagacaga
gggcagtttgattggacaaaattcagagctctggctaggctacacaagaaaaccgataac
agcttggagaagtatctgtgtgcattcatgtccatgtgccggagggtttgccgtcttcct
tccaaagaagaattggtcgatccaaatatttttattcaaccaatcacagaagaacgcgct
tctaggactttatatcgcattgaacttctaagaaaagtacgggagcaggcccttcgccac
ccacagttgtttgaacgcttgaagctttgccacccgaatccagacttgcctatctggtgg
gagtgtggctctcatgatagggatttgctcattggtgctgccaaacacggagtcagccgg
accgactaccacattctgcgtgatcctgaactctcgtttatggcagctcagaggaactac
agtcagagtaaggcggctcactcaaggacttctaccccacttctacagcaataccaagta
gcactttctgcctctcctctcacctctttgcctagactgctaggtgctaaaggtactctt
ctagaggatccgaaagttaagagtgaaagcctcgcagaagagccccagtcctcagaagaa
gaatctatgtcttctgtggaaacaaggacacgagtaaaatctgagcctgtaagtccaaag
aacggtgttttatcacaggctactggagaccagaaatctggtgggaaaagtgaaacagac
agacgcatggttgcagccagaacagaacccctaactccaaacccagcttctaagaagcag
agagtccacaaacgaggaccagaatccagttctgactcggactctgactctgagcactca
tcgtgttcttccagatcctcctcctcctcttcctcctcctcctgttcacactctcgatca
ggctctagttcttcttcatcctcatcttgttcttcggcatcctcttcctcctcctcatct
tcctcctcctcctcctcatcttcttcatcatcatctgaagaaagtgacagtgaagaagat
gtccagaagcgagaaggtacgcctcacgtgaaagcctatgatgaggaaagtgtcgcatca
ctgagcactacccaggatgaaacccaggacagtttccaggcaaacaatggaacggcagag
tctgcttcttacctgttacaaggtggatatatgctggcagcctcatattggccaaaggac
cgggtgatgatcaaccgcttggacagtatttgtcaaacagttctgaaagggaagtggccg
tcagctagaagacattatgatgctaacacggtggcgtccttctataccacaaaactgctg
gatagccctggagcagctacagaacacagcgagcccagcgtccccacgccccccgctgtt
gctgtcaaagaagagcatgaacagtcaacacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaagttgacatttcagaag
caggggcttgcccagaaaagaccatttgatggtgaagatggggccctgggccagcagcag
tacctcactcgccttcgggagctccagagcacatcagagactagccttgttaacttgccc
aaatctatgtcagcatcaggcacttccattcagtcaactcttggtgccaacggagccatc
ctagacagccagcctatagtgaagaaaaggcggggaaggagaaggaatgtggaaggggct
gacatcctcttcttgaacagaaataagccacctaatcatatttccacagggataaaccca
gcggtgccctgcccacagcctcaaagaattcctgatacagaaagtcctgttccagttatc
aatctcaaagatgggacgaggctggcaggagacgacgcgccgaagagaaaggacctggac
aggtggcttaaggagcatcctggttatgtggaggacctcggagcctttatcccaagagtg
cagcttcacgagggaagacccaaacagaaaaggcatcgatgccgaaacccaaacaaacta
gatgtcaacagtctcactggagaggagcgtgtgcagctgattaacagaaggaatgccaga
aaggttggaggtgcatttgctcctcctctgaaagacttatgtagattcttaaaagaaaat
gcagaatatggagtagctcctgaatggggagatgtggttaagcagtctgggtttcttcca
gaaagtatgtatgaacggattctcacaggtcctgttgtgagagaggaagtaagcaggcgg
gggagaaggcctaaaagtggaattgccaaggccaccgtagcagcagcggctcctgccggc
agtgtgccgggcaatcctttgctggccaatggattacttccaggtgtggatctcacagct
cttcaggccttacaacaaaatctgcagaacctgcagtcactgcaagtgactgcagggctg
atgggcatgcctggaggagaaactaaaaacatggctgctatgttccccatgctgttctca
ggaatggccgggttaccaaatctgctaggcatgggaggactcctgtcaaagactgcagaa
tctggggcagaagaaaaacgaggaaatgactctaaggagctagaaggagaaaaagaaagg
acagagagccaaagttcggagaatggaggagaacgctgggtgccaggttctccttccact
tcctccgcggctgcattgagttcagctgcagctgccaagcccatagctcttaacccactg
ttgctgtctaacatactttacccagggatgctgctcactccaggccttaatcttcatctt
ccaaccttgtctcagtccaacacttttgatgtacagaaaaacaaaggtagtgacttaaat
tcatctaagtcagtcgaaataaaggaagaagattccagagttcgagatcaggaagagaaa
gggggaacggagcctagttctctccacgagaacagcacagacgagggttcagagagagct
tcctccgggtctgagagttcatcgtcgtcatctgaggattcagactccagcaatgaagac
tga
DBGET
integrated database retrieval system
