Mastomys coucha (southern multimammate mouse): 116069942
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Entry
116069942 CDS
T07224
Symbol
Ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcoc03009
]
116069942 (Ddx56)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116069942 (Ddx56)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
Pre-60S particles
Helicases
116069942 (Ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
116069942
NCBI-ProteinID:
XP_031196834
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MEDQEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQLLLHKKATGPVMEQAVRGLVLVPTKELARQAQSMIQQLAAYCARDVRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRVLNHLQQKSLKLQDSLELLVVDEADLLFSFGFEDEL
KSLLCHLPRIYQAFLMSATFNEDVQTLKELVLHNPVTLKLQESQLPGPDQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKALLFVNTLERGYRLRLFLEQFSIPSCVLNGELPLRSRCHI
ISQFNQGLYDCVIATDAEILGPQVKGKRRGRGSKGDKASDPESGVARGIDFHHVSAVLNF
DLPPTAEAYVHRAGRTARANNPGIVLTFVLPTEQSSLGKIEELLSGEGETPTLLPYQFQM
EEIESFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGNVPDYLVPAALRGLVHPRKKRRKMPFSRKAKKVKAQNPLRDFKRRGKKPK
PTAKPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaagaagcgctgggttttgaacacatggggctggatccccgactcctgcag
gctgtcaccgacttaggctggtcgcgacctacgttgatccaggaaaaggccatacctctg
gcgttggaggggaaggacctcctggcccgcgcccgcacaggctccgggaagaccgcagct
tatgctattccgatgcttcagttgcttctgcacaagaaggcgacaggtcctgtaatggaa
caagctgtgagaggccttgtccttgttcctaccaaggagctggcgcggcaggcccagtcc
atgatccagcagctggccgcctattgtgctcgggatgtgcgagtggctaatgtctcagct
gctgaagactcagcttctcagagagctgtgttgatggagaagccagatgtggtggtgggg
accccatcccgagtattaaaccacttgcagcagaaaagcttgaagctccaggactccctg
gagctactggtggtagacgaagctgaccttctgttttcctttggctttgaggatgaactc
aagagtcttctctgtcacttgcctcggatttaccaggcttttctcatgtcggccactttc
aatgaggatgtacaaactctgaaggagctggtactacataacccggttaccctcaagtta
caggagtcccagttgccgggaccagaccagctccagcagtttcaggtggtctgtgagaca
gaagaagacaagttcttgctgctgtatgccctgctcaagctgtcactgattcggggcaaa
gccttgctctttgtcaatactctagagaggggttaccggctccgtcttttcctggaacag
ttcagcattccctcctgcgtgctcaacggagaactcccactgcgttccaggtgccacatc
atctcacagttcaaccaaggcttgtatgactgcgttatagcgacagatgctgaaatcttg
ggaccccaagtcaaaggcaagaggcgaggccgtgggtccaaaggagacaaggcctctgat
ccagagtcgggtgtggcccggggcatagatttccaccatgtgtctgcggtcctcaatttt
gaccttcctcccactgcagaagcctatgtccatcgagctggcaggacagctcgagccaac
aacccaggcatagttctgacctttgtgctgcccacagagcagtcttccttgggaaagatt
gaggagcttctcagtggagagggcgagacccccaccctgcttccctaccagttccagatg
gaggagattgaaagctttcgctatcgctgcagggatgccatgcgctccgtgaccaagcag
gccattcgagaggcgagattgaaggagatcaaggaggagcttctacattcagagaagctc
aagacatactttgaagacaaccccagagaccttcagctgctacgccatgatctgcccttg
cacccggcagtggtaaagcctcatttgggcaatgtccctgactacttggttcctgctgct
cttcgtggccttgtacatcctcgaaagaaaaggagaaagatgcccttctctaggaaggct
aagaaagtgaaggcccagaacccactacgtgacttcaagcgcaggggaaagaaacctaag
cccacagcaaagccttcttga
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