Mastomys coucha (southern multimammate mouse): 116070038
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Entry
116070038 CDS
T07224
Symbol
Lrrc29
Name
(RefSeq) leucine-rich repeat-containing protein 29 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116070038 (Lrrc29)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116070038 (Lrrc29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_At5g56370
LRR_Zer-1
F-box-like
F-box
LRR_14
Motif
Other DBs
NCBI-GeneID:
116070038
NCBI-ProteinID:
XP_031197009
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MADSLPLEMLTYILSFLPLSDQKEASLVSRAWYCAAQNALRETNVRYNIPVSSASLSAIK
SLGLRGISCISLTNLDGSPASHQVLQSVAYHLGPHLQSLCLGGGSPTEASFLALILGCPV
LRTLDLSGCNSLFTSGTLLAQPETVQCVRKALSGLRDLKLAGLRDLTDLSFNHLSGCFPS
LERLSLAYCHLTFELGPTWGSVSPQVSSPSQLSFHNLLQFIKERAGTLRALDLSGTGLPP
EALQALGQVTGLKLEELNLHSCRDLSSEAVATLCRQQPGLTSLDLSGCSDLTDGALLAVS
RGLHHLRHLSLKKLQRLTDAGCAALGALHELQSLDMAECCLVSGRELAQVLGSVRRAPPA
LTSLRLAFCSSLKDASVLSMIPALGPSLKVLDLSSCVALTNQTMQAICTYLIHLSVLRLA
WCKELQDWGLLGLKEPSDEPVLNPQLHQEVENQAPDPQEPSSEPQGSSLLMLQALQELDL
TACSKLTDASLAKVLQFPQLRQLSLSLLPAFTDTGLVAVARGCPSLERLTLSHCSHLSDE
GWAQAARLWPRLQHLNLSSCSQLTEQTLDTIGQACRQLRVLDIAMCPGINMAAVKHFQAQ
LPQVTCIQSRFVGGADLTLTL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcgctgcctctggagatgctcacttatatcctgagcttcctacctctgtca
gatcagaaagaggcctcccttgtgagtcgggcctggtactgtgcagcccagaatgccctt
cgggagacaaatgtacgctacaacattcctgtgtcctctgcctcactctcagccatcaag
agtttgggcctaagaggcatttcatgcatcagcttgaccaatctggatggctcgccagct
tcgcaccaggtactgcagtctgttgcttaccacttaggcccacacctgcaaagcttatgc
ctgggtggaggcagccccacagaggcgtccttcttggccctgatcctgggatgcccagtc
cttcgcacacttgatctcagtggctgcaacagtctcttcacatcaggcactctgctggct
cagcctgagacagtgcagtgtgtccgaaaggcattgagtggccttcgtgatcttaaactg
gctggcctgcgtgacctgactgacctcagcttcaaccatctcagtggttgtttccccagc
ctggagcgtctctcgttggcttactgccatcttacctttgagttgggcccaacctggggc
tccgtcagcccccaggtttcctctccctcccagctttccttccacaacttgctacagttc
atcaaagaaagagctggtacactgcgtgccctagacctcagtggtactggcttgccacct
gaggccctacaagccctgggccaagtgactggattgaagttggaggagctgaatttacac
agctgtagagacctctcctcagaggcggtggccaccctgtgccgccagcagcctggtctt
acttccctggaccttagtggctgctcagacctgaccgatggggcactcttggctgtgagc
cgaggcctacaccacctgcggcacttgagtctgaagaaactgcagagactgacggatgca
gggtgtgcagccctaggggccctgcatgagttgcagagcctagacatggctgaatgctgt
ctggtgagcggtcgggaactggcccaggtcctaggctcagttcgcagagctccacctgca
ctgacttccctcaggctggctttctgctcttcactgaaggatgcctcagttctctccatg
atcccagcattgggcccaagcctcaaggtgctagatttgtcctcctgtgtggccctcacc
aaccagaccatgcaggccatctgcacctaccttattcacctgtcagtcctgcgcctggct
tggtgcaaggagctccaggactgggggcttttggggttgaaggagccaagtgatgagcct
gtgctaaatccccagctacaccaagaggtggaaaatcaggctcccgaccctcaggagccc
agttccgagccacagggctcctccctgctcatgcttcaggccctgcaggagttggacctc
acagcctgcagtaagctgactgatgccagtttggcaaaggtgctccagttccctcagctg
aggcagttatcattgagcctgttgccagctttcacagacacgggcttggtggctgtggct
aggggctgtcctagcctggagcgcttgacattgagtcactgcagccacctcagtgacgag
ggatgggcccaggcagccaggttgtggccaaggctgcagcatctcaatctgtccagctgc
agtcagctcacagagcaaactctggataccattgggcaggcatgcaggcagcttcgagtg
ttggacatagccatgtgtcctggtatcaacatggcagccgtcaaacattttcaagcacag
ctgcctcaggtgacgtgtatccagtctcgctttgtgggaggggctgacctgaccctgaca
ctttga
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