Mastomys coucha (southern multimammate mouse): 116070061
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Entry
116070061 CDS
T07224
Symbol
Ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116070061 (Ctcf)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116070061 (Ctcf)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116070061 (Ctcf)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116070061 (Ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Actin_micro
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
116070061
NCBI-ProteinID:
XP_031197063
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEEEEEPAVEIEPEPEPQPQPPPPPQPVAPAPPPAKKR
RGRPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEAAQAATTDA
PNGDLTPEMILSMMDR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaggagtctgaaactttcattaaaggaaag
gaaagaaagacttaccagagacgccgggaaggggggcaggaagaagatgcttgccacctg
ccccagaaccagaccgatgggggtgaggtggtccaggatgtcaacagcagtgtacagatg
gtaatgatggaacagctggatcctacccttctccaaatgaagactgaagtaatggagggt
acagtggctcctgaagcagaggctgcagtggatgatacccagatcataaccttgcaggtt
gtaaatatggaggaacagcccattaacataggagagcttcagcttgtccaagtacctgtt
cctgtgactgtacccgttgctactacttcagtagaagaacttcagggggcttatgagaat
gaagtctctaaagagggccttgcagaaagtgaaccgatgatatgtcacaccttacctttg
cctgaaggatttcaggtggtgaaagtgggggccaatggagaagtggagacactagagcag
ggggagcttcctcctcaggaagaccctagctggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaacttcgttacacagaggaaggcaaagat
gtggatgtgtctgtgtatgattttgaggaagaacaacaggaaggactattgtctgaagtt
aatgcagagaaagtggttggtaacatgaagcctccgaagccgacaaaaattaaaaaaaaa
ggtgtaaagaaaacattccagtgtgagctttgcagttacacgtgtccacggcgttcaaat
ttggatcggcacatgaaaagccacactgatgagagaccacacaagtgccatctctgtggc
agagcattcagaacagtaaccctcctgaggaatcatcttaacacacacacaggtactcgt
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagaattggtgcggcat
cgtcgttataaacacactcatgagaaaccttttaagtgttccatgtgtgattatgccagt
gtagaagtcagcaaattaaaacgacacattcgctctcatactggagagcgcccgttccag
tgcagtttgtgcagttatgccagcagggacacatacaagctgaaaaggcatatgagaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccagagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcattgtccc
cattgtgacactgtcatagccagaaaaagtgatttgggtgtccacttgagaaagcagcat
tcctatattgagcagggcaaaaaatgtcgctactgtgatgctgtgtttcatgagcgatat
gctctcatccagcatcaaaaatcacacaaaaatgagaagcgcttcaagtgtgaccagtgt
gattatgcttgtagacaggagaggcacatgatcatgcacaagcgcactcacactggggag
aagccttatgcctgcagccactgcgacaagaccttccgccagaaacagctccttgacatg
catttcaagcgctatcatgatcccaactttgtccctgcagcctttgtctgttccaagtgt
gggaaaacattcacacgccggaatacaatggcaagacatgcagataactgtgctggtcca
gatggtgtagagggggaaaatggaggggagacaaagaagagcaaacgaggaagaaaaaga
aagatgcgatctaaaaaagaagactcctctgatagtgaagaaaatgctgagccagatctt
gatgacaatgaggaggaggaggagcctgccgtagaaattgaacctgagccagagcctcag
cctcagcctccgcctccgcctcagcctgtagccccagccccaccacctgccaagaagaga
agggggcgacctcctggaagaaccaaccagcccaaacagaaccagccaaccgccatcatt
caggttgaagatcagaatacaggtgcaattgagaacattatagttgaagtcaaaaaagag
ccagatgccgagcctgcggagggggaagaagaagcagctcaggcagccaccacagatgcc
cccaatggagacctcacgcctgagatgattctcagcatgatggaccggtga
DBGET
integrated database retrieval system
