Mastomys coucha (southern multimammate mouse): 116070371
Help
Entry
116070371 CDS
T07224
Name
(RefSeq) AFG3-like protein 1 isoform X1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
116070371
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116070371
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mcoc03110
]
116070371
Peptidases and inhibitors [BR:
mcoc01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
116070371
Chaperones and folding catalysts [BR:
mcoc03110
]
Other chaperones and cochaperones
AAA proteases
116070371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_22
AAA_16
TIP49
AAA_2
RuvB_N
AAA_33
AAA_17
AAA_28
AAA_14
nSTAND3
Mg_chelatase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
116070371
NCBI-ProteinID:
XP_031197609
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MFLRLVGAAGSRALAQPFSKLWRCGGCAGSGGTVWSSVRACGIALQGHPGRCSQQLALQG
RLTSFSPRLYSKPPRGFEKFFKNKENRKSASPENSVSPKKEPKNAGTGGDGSNRGGKGDD
FNWWKRMQKGEFPWDDKDFRSLAILGAGVAMGFLYFYFRDPGKEITWKHFVQYYLARGLV
DRLEVVNKQFVRVIPVPGMTSEKFVWFNIGSVDTFERNLESAQWELGIEPTNQAAVVYTT
ESDGSLLRSLLPSLVLVSILLYAMRRGPMGTGRGGRGGGLFSVGETTAKILKNNIDVRFA
DVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP
FITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQE
NTLNQMLVEMDGFNSATNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFK
VHLRPLKLDERLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLCLSVQEKHFEQA
IERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQY
LPREQYLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQIVQFGMSE
KLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTECREQVEKVGR
RLLEKEVLEKADMIELLGPRPFAEKSTYEEFVEGTGSLEEDTSLPEGLKDWNQGREEGGT
EQCLQESPA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttcctccggctggtgggggcagcgggcagtcgggccctggcccagcctttttccaag
ctgtggcgatgtggcggatgcgcaggaagcggcgggacggtctggagcagcgtgagggcc
tgtggcattgctctgcagggtcatccggggagatgctcacagcagctggctctgcaggga
agactgacttcattttccccgagactgtattcaaaacctcccagagggtttgagaagttt
tttaagaataaggagaacagaaaaagtgcaagcccagaaaattcagtatctccaaaaaaa
gaaccaaagaatgctggcactggaggagatggaagcaacagaggagggaagggagatgac
tttaactggtggaaacggatgcaaaagggagagtttccttgggacgacaaggacttccgg
agtctggctattttgggagctggtgtggctatgggatttttatatttctattttcgagat
cctggaaaagagatcacctggaaacactttgtacagtattacctggccaggggtctggtg
gatcggcttgaggttgtgaacaagcagtttgtgcgtgttattcctgttcctgggatgaca
tctgagaagtttgtgtggtttaacattggtagtgttgacacctttgaacggaaccttgaa
tctgctcagtgggagctgggcattgagcccaccaaccaggctgcggtggtctatactact
gagagtgacggctctcttcttagaagtctcctgcccagtctggtcctggttagcatactc
ctctatgctatgaggaggggcccaatggggactggtcgaggtgggcgaggaggcggcctc
ttcagtgttggtgagacaacagccaagatcttaaagaacaacatcgatgtgcgatttgca
gatgtggctggctgtgaagaagccaaactggaaattatggagtttgtgaatttcctcaag
aacccaaagcaatatcaggacttaggagccaaaattccaaagggagcgatgctcactggt
ccacctggtactggtaaaacacttcttgcaaaagcaactgctggggaggccaacgtgccc
ttcatcactgtgaatgggtcggagttcctggaaatgtttgttggtgttgggccagcacgg
gtccgtgacatgtttgcaatggcccgaaaacacgctccttgtattttattcattgatgag
attgatgcaattggcaggaagcgaggtcgtggccatctgggaggccagagtgaacaggaa
aacactttaaaccagatgcttgtggagatggatgggttcaactctgccactaatgtggtc
gtgttagctggcaccaatcgtcctgatatccttgacccagccctgacacggcctggccgg
tttgaccgccagatctacatcggtccccctgatatcaaaggcaggtcctctattttcaag
gtccacttgcgtccactcaagctggatgaaaggctcagcaaggatgctctttcgaggaag
ctggcagctcttactccaggcttcactggtgctgatatttccaatgtgtgcaatgaagca
gccctgattgctgcccgccatctctgcctttctgtccaggagaagcactttgaacaagcc
atcgagagggtcattggaggccttgagaagaagacccaggtcctacaacccagtgaaaag
acaactgtagcctaccacgaggctgggcatgcagtggtgggctggttcttggagcatgca
gaccctctgctgaaggtttccatcatacctcggggcaaggggcttggctatgcccagtac
cttccccgtgaacagtacctctacacacgggagcagctcttcgaccgaatgtgtatgatg
ctggggggtagagtggctgagcagctgttctttggtcagatcaccacaggggctcaggat
gacctgaggaaggtcacccagagtgcctatgcccagattgtgcagtttggaatgagtgag
aagctgggccaggtgtcttttgacttccccagacaaggcgaaaccatggtggagaagcca
tacagtgaggctactgcccagctcattgatgaagaagtccgctgccttgtcaggtctgcc
tataatcgaaccctggagctgctcacagagtgccgggagcaggtggagaaggttggcagg
cgtctcctggagaaagaagtgctggagaaagctgacatgatagagctcttgggccctcga
ccctttgcagagaagtccacctatgaggaatttgtagagggcaccggcagcctagaggag
gacacatcccttcctgaggggctgaaagactggaatcaggggcgggaggaaggaggtact
gagcagtgcttgcaggagagccctgcatag
DBGET
integrated database retrieval system
