Mastomys coucha (southern multimammate mouse): 116070780
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Entry
116070780 CDS
T07224
Symbol
Slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116070780 (Slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcoc00536
]
116070780 (Slit2)
Glycosaminoglycan binding proteins [BR:
mcoc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116070780 (Slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRRCT
LRR_9
LRR_1
hEGF
LRR_14
EGF_TEN
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
116070780
NCBI-ProteinID:
XP_031198071
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MSGIGWQTLSLSLGLVLSILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFPE
LLFLGTTKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT
NLPETITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTLAKGTF
SALRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTA
ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN
VQHKMFKGLEGLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDTLHSL
STLNLLANPFNCNCHLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGN
DDNSCSPLSRCPSECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKELSNY
KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND
ISVVPEGAFSDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL
LLTTPSKKFTCQGPVDVTIQAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDV
PIHACISNPCKHGGTCHLKEGENDGFWCTCADGFEGENCEVNIDDCEDNDCENNSTCVDG
INNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQDLNPCQHDSKCILTPKGYKCDCTPG
YIGEHCDIDFDDCQDNKCKNGAHCTDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDN
FDCQNGAQCIIRINEPICQCLPGYLGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQ
IATDEDSGILLYKGDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLT
LDSSLSLSVDGGSPKVITNLSKQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGC
IRNLYINSELQDFRKVPMQTGILPGCEPCHKKVCAHGTCQPSSQSGFTCECEEGWMGPLC
DQRTNDPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQMIKCKHGKCR
LSGLGQPYCECSSGFTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCT
GGQCCGPLRSKRRKYSFECTDGSSFVDEVEKVVKCGCTRCNS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcattggctggcagacactgtccctatcgctggggttagtgttgtcgatcttg
aacaaggtggcgcctcaggcgtgcccggcccagtgctcctgttcaggcagcacagtagac
tgtcatgggctggcactgcgcagtgtgcccaggaatatcccccgcaacacggagagactg
gatttgaatggaaataacatcacgaggatcacgaagacagattttgctggcctcaggcac
ctcagagttcttcagctcatggagaacaagatcagcaccattgagaggggagcattccag
gatcttaaggagctggaaagactgcgtttaaacagaaataaccttcagttgtttcctgag
ctgctgtttctcgggactacgaagctctaccggcttgatctcagtgaaaatcaaattcaa
gcaattccaaggaaggctttccgtggagcagttgacattaaaaatctgcaactggattac
aaccagatcagctgcattgaagatggggcattcagagctctgcgggatctggaagtgctc
actctgaacaataacaatattactagactttcagtggcaagtttcaaccatatgcctaaa
cttaggacatttcgactgcactcgaacaacctgtactgcgactgccacctggcttggctc
tcagactggcttcgccagaggccacgggtgggcttgtacactcagtgtatgggcccatcc
cacctgaggggccacaacgttgcagaggttcaaaagcgagaatttgtctgcagtgatgag
gaagaaggtcaccagtcattcatggctccctcctgcagtgtgctgcactgccctgctgcc
tgtacctgtagcaacaacattgtagactgccgagggaaaggtctcactgagatccccaca
aatcttcctgagaccatcacagaaatacgtttggaacagaactccatcagggtcatccct
ccaggagccttctcaccatacaaaaagcttagacgactagacctgagcaataaccagatc
tctgaacttgcgccagatgccttccaaggactgcgttctctgaattcacttgtcctgtat
ggaaataaaatcacagaactcccaaaaagtttatttgaaggactattttccttgcagcta
ctattattgaatgccaacaagataaactgccttcgggtagatgcttttcaggacctgcac
aacttgaatcttctctccttatatgacaataagcttcagactcttgccaagggcaccttc
tcagctctcagagccatccaaactatgcatttggcccagaatcctttcatttgtgactgc
catctcaagtggctagcggattatctccacaccaacccaattgagaccagcggtgcccgt
tgcaccagcccccgccgcctggcaaacaaaagaattggacagatcaaaagcaagaaattc
cgttgttcagctaaagaacagtatttcattccaggtacagaagactatcgatcaaaatta
agtggagactgctttgcagacttggcttgtcctgaaaagtgtcgctgtgaagggaccaca
gtagactgctccaatcaaaaactcaacaaaatcccagaccatattccccagtacacagca
gagctgcgtctcaataataatgaattcacagtgttagaagccacaggaatatttaagaaa
cttcctcagttacgtaaaatcaactttagcaacaataagatcactgatatcgaggagggc
gcattcgaaggcgcgtctggtgtgaatgaaattcttctcaccagtaaccgtttggaaaat
gttcagcataagatgttcaaaggactggagggcctcaaaacattgatgctaagaagtaat
cgaataagctgtgtagggaatgacagtttcataggacttggctctgtgcgtctgctctct
ttatacgacaatcaaattaccacagttgcaccaggagcatttgatactctccattcatta
tctacactaaacctcttggccaatcctttcaactgtaactgtcacctggcatggctggga
gaatggctcagaaggaaaagaattgtaacaggaaatcctcgatgccaaaaaccctacttc
ctgaaggaaatcccaatccaggatgtagccattcaggacttcacctgtgatgatggaaat
gatgacaatagttgctctccactctcccgttgtccttcggaatgtacctgcttggataca
gtggtacgatgtagcaacaagggcttgaaggtcttgcctaaaggtattccaagagatgtc
acagagctgtatctagatgggaaccagtttacactggtcccgaaggaactctctaactac
aaacatttaacacttatagacttaagtaacaaccgaataagcaccctttccaatcaaagc
ttcagcaacatgacccagcttctcaccttaatcctcagttacaaccgtctgagatgtatc
cctccacgaacctttgatggattaaagtctcttcggttactgtctctacatggaaatgac
atttctgtcgttcctgaaggtgccttcagtgacctttcagccttgtcacacttagcaatt
ggagccaaccctctttactgtgattgtaacatgcagtggttatccgactgggtgaagtcg
gaatataaggaacctggaattgcacgctgtgccggccctggagaaatggcagataaattg
ttactcactacaccctccaaaaaatttacatgtcaaggtcccgtggatgtcactattcaa
gccaagtgtaacccttgcttatcaaatccatgtaaaaacgatggcacctgtaacaatgac
ccagtcgatttttatcgatgtacctgtccatatggtttcaagggccaggactgtgatgtc
cccattcatgcctgtatcagtaatccatgtaaacatggaggaacttgtcatttaaaagaa
ggagagaatgatggattctggtgtacttgtgctgatgggtttgaaggagaaaactgtgaa
gtcaatattgatgattgtgaagacaatgattgtgaaaataattctacatgcgttgatgga
attaacaactacacatgtctttgccccccagaatacacagctgctaatctgaatgaggtg
gaaaaaggtgaactgtgtgaggaaaagctggacttctgtgcacaagacctgaatccctgc
cagcatgactccaagtgcatcctgactccaaaaggatacaagtgtgactgcactccagga
tacattggcgagcattgtgacattgactttgatgactgccaagataacaagtgtaaaaac
ggtgctcactgcacagatgcagtgaatggatacacatgtgtctgtcctgaaggctacagt
ggcttgttctgtgagttttctccacccatggtcctccctcgcacaagcccctgtgataat
tttgattgtcagaatggagcccagtgtatcatcaggataaatgaaccaatatgccagtgc
ttgcctggctacctgggagagaagtgtgagaaattggtcagtgtgaactttgtaaacaaa
gagtcctatcttcagattccctcagccaaggttcggcctcagacaaacatcacacttcag
attgccacagatgaagacagcggcatcctcttgtataagggtgacaaagaccacattgcc
gtggaactctatcgagggcgagttcgagccagctatgacaccggctctcacccggcttct
gccatttacagtgtggagacaatcaatgatggaaacttccacattgtggagctactgacc
ctggattccagtctttccctctctgtggatggaggaagccctaaagtcatcaccaatttg
tccaaacagtctactctgaatttcgactctccgctttatgtaggaggcatgcctgggaaa
aataacgtggcatccctgcgccaggcccctgggcaaaacggcaccagcttccatggctgt
atccggaacctttacattaacagtgagctgcaggacttccggaaagtgcccatgcaaacc
ggaattctgcctggctgtgaaccatgccacaagaaagtatgtgcccatggcacatgccag
cccagcagccaatcaggcttcacctgcgaatgtgaggaagggtggatggggcccctctgt
gaccagagaaccaatgatccctgcctcggaaacaaatgtgtacatgggacctgcttgccc
atcaatgccttctcctatagctgtaagtgcctggagggccatggcggtgtgctctgtgat
gaagaagaagatctctttaacccctgccagatgatcaagtgcaagcatgggaagtgcagg
ctctctggactcgggcagccctactgtgaatgcagcagtggattcacaggggacagctgt
gatagagaaatttcttgtcgaggggaacggataagggattattaccagaagcagcagggt
tacgctgcctgtcaaacaactaagaaagtatctcgcttggaatgcagaggcgggtgtact
ggagggcagtgctgtggacctctgagaagcaagagacggaaatactcgttcgaatgcacg
gatggatcctcatttgtggacgaggttgagaaagtggtgaagtgcggctgcacgagatgt
aactcctaa
DBGET
integrated database retrieval system
