Mastomys coucha (southern multimammate mouse): 116070931
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Entry
116070931 CDS
T07224
Symbol
Pcdh7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116070931 (Pcdh7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcoc01009
]
116070931 (Pcdh7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116070931 (Pcdh7)
Protein phosphatases and associated proteins [BR:
mcoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116070931 (Pcdh7)
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Protocadherins
116070931 (Pcdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
KIAA1549
TMEM154
LYRIC
MLANA
Adeno_E3_CR2
EphA2_TM
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
116070931
NCBI-ProteinID:
XP_031198188
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MLRMRTTGWARGWCLGCCLLLPLCFSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGSGEGRRLGPADSAPYPGGGGNSASGGGSGGSKRRLDAPEGGGGTSPSGR
SSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITD
VNDNSPRFEKSVYEADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRL
DETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPAIEIRKI
GRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQ
NKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPVFGQSVV
EVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPDSGDILVNTVLDRE
QTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGM
VTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTISFDREHQTMYTFRVKAVDGGDP
PRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADLN
YSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVN
ESVSNATVIDSQIVRSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMM
ARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPN
GQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQA
VQDLPPANTFVGAGDNISIGSDHCSEYSCQTSNKYSKQPFRRVTFSVVSQPQDPHQGSLQ
SCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVAL
TGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDR
NRNLLSKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccacgggatgggcgcgcggctggtgcttgggctgttgtctcctt
ctgccgctctgcttcagcctggccgccgccaagcagctgctccggtaccggctggctgag
gagggccccgccgacgtgcggatcggcaatgtggcttcggacctgggcatcgtgaccggc
tcgggcgaggtgactttcagccttgagtctggctctgagtatctgaagattgacaacctc
accggcgagctgagcaccagcgagcggcgcatcgaccgagagaagctgccccaatgtcag
atgatcttcgacgagaacgaatgtttcctggacttcgaggtgtcggtgatagggccctcg
cagagctgggtggacctgtttgagggtcgggtcatcgtgctggacatcaacgataacacg
cccaccttcccgtcgccggtgctcacgctcacggtggaggagaaccggcctgtaggcacg
ctctacttgctgcccacggccaccgatcgtgactttggtcgcaatggcatcgagcgctac
gagctgctccaggagcccgggggtggcggcggcagcggcgagggaaggcgcttggggccg
gcggacagcgccccctacccagggggcggcgggaacagcgcgagcggcggcggctctgga
ggttccaagcggcggctggacgcgcctgagggtggcggcgggacgagtcctagtggccga
agcagcgtgttcgagcttcaggtggcagacactccagacggcgagaaacaaccgcaactg
atcgtgaagggggcgctggaccgggagcagagagattcctatgagctgaccctccgagtg
cgcgacgggggagacccacctcgctcttcgcaggccatcttgcgtgtgctcatcaccgac
gtgaatgacaacagtccccgttttgagaagagcgtgtatgaggctgacctggctgaaaac
agcgctccgggcacccccatcctacagttgcgcgccaccgatttggatgtaggggtcaat
ggacagatcgagtatgtatttggggctgccaccgagtcggtaagacggctactgcgcctg
gatgaaacgtcgggctggctcagtgtcttacaccgtatcgaccgcgaggaagtgaatcag
ctgagattcacagtaatggcccgtgaccgcgggcagccccccaagaccgataaggccacc
gtggtcctcaacatcaaagatgagaacgacaacgttcccgccatcgaaatccgcaagata
gggcgcatcccacttaaggacggggtggcaaacgtggccgaagatgtcctggtggacacc
cccatcgccctggttcaggtgtccgaccgagaccaaggcgagaacggggtagtcacctgt
accgtagtgggagatgtgcctttccagcttaagccagccagtgacacagagggcgatcag
aacaagaaaaagtacttcctgcacacatcggccccactagactatgagaccacccgggag
ttcaatgtggtcatagtagctgtggactctggcagtcccagcctctccagcaacaattcc
ttggtggtcaaggtgggagacactaatgacaacccccctgtctttggccagtctgtggtt
gaggtgtactttccagagaacaacattcccggggagagggtagccaccgtactggcgaca
gacgctgacagcggcaagaatgcagagattgcctactcgctggactcctcggtgatgggg
acttttgccatcgatcccgattctggagacatcctggtcaacacagtactggaccgggag
cagactgacaggtatgagtttaaagttaatgccaaagacaaaggcatccctgtgctgcaa
ggcagcaccacggtgattgtacaggtggctgataaaaatgacaacgaccctaagtttatg
caggacgtctttaccttttatgtgaaggaaaacttacagcccaacagccctgtgggcatg
gtcaccgtgatggatgctgacaagggacggaatgcagagatgagcctgtacatagaggag
aacagtaacattttttctattgaaaatgacacagggaccatttactccacaatatctttt
gacagggaacaccagactatgtacactttcagagtgaaggctgtggatgggggagatcct
cccaggtcggccacagccacagtctctctctttgtgatggatgaaaatgacaacgctccc
actgttacccttcccagaaacatttcatacacgttgctgccaccttcaagtaatgtcagg
acagtagtagctacagtgttagccacagacagtgatgatggcatcaatgcggacttgaac
tacagcattgtgggagggaatcctttcaagctgttcgagattgattccaccagtggtgtg
gtttccttagtgggaaaactcacccagaagcattatggcttgcacaggctggttgtacaa
gtgaatgacagcggccagccttcccagtccactacgactttggtgcatgtatttgtcaat
gaaagtgtttccaatgcgacagtgattgactctcagatagtccgaagtttgcatacccca
ctcacccaggatatagccggtgacccaagctatgaaattagcaaacagagactcagtatt
gtcattggggtggttgctggcattatgacagtgattctaatcattttaattgtcatgatg
gctagatactgcaggtccaaaaataaaaatggctacgaagctggcaaaaaagaccacgaa
gacttttttacaccccagcagcatgacaaatctaaaaagcctaaaaaggacaagaaaaac
aaaaaatctaagcagccactctacagcagtatcgtcactgtcgaagcttctaaaccaaat
ggacagaggtatgatagtgtcaatgagaagctgtcagacagcccaagcatgggccgatac
agatctgttaatggtgggcctggcagtccagacctggcaaggcattacaaatccagttcc
ccattgcctactgtccagcttcatccccagtcaccaactgcaggcaaaaaacatcaagct
gtacaagatctaccaccagccaacacatttgtgggagcaggagacaacatttcaattgga
tctgatcactgctctgagtacagctgtcaaaccagtaacaagtacagcaaacagccattt
cgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactgcag
agttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcaggg
ccaagactgggtgcccttccactcccagaggacaactatgagaggaccacgccggatggc
agtgttggtgaggcagagcatatggaaaatgattcaaggcctcttccggatgtagcactg
actggcaagtgcacccgtgaatgtgacgaatatggccattcagactcctgctggatgcca
gtgcgcacttccccagagaggaagaagagccagcccaaactctccactttcatgcctgtt
gatgaacgaggaagtcaggagaagctggcaaatggcgaggctgccatcatgggcgaccgc
aacagaaacctcctgagcaaaaagttgacctcatcctatgagaccttcagtgcagctagt
ttcagcaaaaatgaggaagccaaccccgaggatattcctttaacaaaaacaggggaatat
aagccatctcctgtcaacactctcactagaagagaagtttatctgtag
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integrated database retrieval system
