Mastomys coucha (southern multimammate mouse): 116071045
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Entry
116071045 CDS
T07224
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03030
DNA replication
mcoc03410
Base excision repair
mcoc03420
Nucleotide excision repair
mcoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116071045 (Rfc1)
03410 Base excision repair
116071045 (Rfc1)
03420 Nucleotide excision repair
116071045 (Rfc1)
03430 Mismatch repair
116071045 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoc03032
]
116071045 (Rfc1)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116071045 (Rfc1)
DNA replication proteins [BR:
mcoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116071045 (Rfc1)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116071045 (Rfc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
RuvB_N
BRCT_2
Rad17
AAA_14
AAA_22
AAA_16
AAA_7
AAA_5
AAA_33
AAA_18
nSTAND3
AAA_17
NTPase_1
AAA_30
NPHP3_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
116071045
NCBI-ProteinID:
XP_031198270
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MHAYMQDIRKFFGVISSGKKPVNETVKTEKTKPSEGTVKGKKAVEEAKVNNSSKEDASKP
KQHSKKKRVIYDSDSESEETVQVKNAKKKSEKLPRSSKPGKISRKDPVTYVSETDEDDDF
VCKKAASKSKENGVSTNTYLGTSNMKKNEENIKSKNKPLSPIKLTPTSVLDYFGTESVQR
SGKKMVASKRKESSQNTEDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLALLDDEP
KTKKARKDSEEGESFSPVQADLSKAAKQKSPAKAERFSNGRKTYSPAKHGKGRGSEDTKQ
PCRPAHQKDAACSPKASSKLALMKAKEESSYKETELLPARRKESATESRGEKTTPKKTKG
SPAKRESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLE
SIEREEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKILDEDGLLDLI
RTMPGKKSKYEIAAEAEMKKEKSKLERTPQKNDQGKRKSSPTKKESDSKKSKLTPLKNSP
MKAMKKEASVCPGGLDVKETHGSCSGNKEECLLWVDKYKPTSLKSIIGQQGDQSCANKLL
RWLRNWHKSSEEKKHAAKSGKLASKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYM
ELNASDTRSKNSLKAIVAESLNNTSIKGFYTSGAAPSVSARHALIMDEVDGMAGNEDRGG
VQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGL
KIPPPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRAKKDIRLGPFDVAR
KVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMKKHLMLLSRAAD
SICDGDLVDSQIRSKQNWNLLPTQAIYASVLPGELMRGYMTQFPSFPSWLGKHSSTGRHD
RIVQDLSLHMSLRTYSSKRTVNMDYLSHIRDALVRPLTSQGVEGVQHVVTLMDTYYLMKE
DFENIMEVSSWGGKPSAFSKLDPKVKAAFTRAYNKEAHLTPYSLQAVKTSRLSTGPALDS
EYSEELQEDDAQSDEKEQDAVETDAMIKQKKTRSSKPSKSEKEKESKKGKGKNWKK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcatacatgcaggatattcggaaattctttggggttatatcaagtggaaaaaag
cctgtaaacgagacagtaaagactgagaagacaaaaccttccgagggaactgtcaaagga
aagaaagcagtagaggaagccaaggttaataactccagtaaagaggatgcctccaaacca
aagcagcacagcaagaagaagagggtcatctatgactcagattcagaatcagaggagaca
gtacaggtaaaaaatgctaaaaagaaatcagaaaaattgccacgatcttctaaacctggt
aaaatctctcggaaggatcctgttacttacgtttctgagacagatgaggacgatgacttt
gtatgtaaaaaggcagcctccaaatcaaaagagaacggtgtatctacaaatacttacctt
ggaacatcaaatatgaaaaagaatgaagaaaacattaagagtaagaataaaccgttatct
ccaataaaactcacaccaacatcagtgcttgattattttggaactgaaagtgtccagaga
tctgggaagaagatggtggcaagcaagaggaaagagtcttctcagaacacagaagattcc
agattaaatgatgaagccatcgccaagcagctgcagctcgatgaagatgcagagctggag
aggcagttgcatgaagatgaagagtttgcaagaacactggccttgttggatgacgaaccc
aagaccaaaaaggcccgaaaggattctgaagagggagagtcattttcacctgtccaagct
gatttaagcaaagcagcaaaacagaaaagcccagcgaaagcagagcgtttctcaaatgga
agaaagacctacagtcctgccaagcatggcaagggcaggggctcagaagacacgaagcag
ccctgcagaccagctcaccagaaggacgctgcctgctcccccaaggccagttccaaactg
gctctcatgaaagcgaaagaagaaagttcttacaaagaaacagagctgctgcctgcaaga
agaaaagaaagtgccactgagtccagaggagagaaaactactcctaagaaaacgaaaggt
tctccagctaagagagagtctgtaagcccagaagattctgaaaagaagcgcactaattat
caagcttatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagaaata
cccaagggagctgagaattgcttggaaggcctgacgtttgtgatcacaggagtgctggag
tccattgaacgagaggaggccaagtctctaattgaacgttacggggggaaagtaacagga
aatgtgagcaagaaaaccaactacctcgtcatgggccgggacagcgggcagtccaagagt
gacaaggcagcagctctgggaacaaaaatccttgatgaagatggcctgttggatctgatt
cgaactatgccaggcaagaaatccaagtatgaaatagctgctgaggctgagatgaagaaa
gaaaagtccaaattggaacgaacaccccaaaaaaatgaccaaggaaaaagaaaaagtagt
ccaaccaagaaggagtcagactctaaaaagagcaagctaactcccctgaagaacagtcct
atgaaggcaatgaagaaggaggcaagtgtgtgtccagggggcctggatgtcaaggagaca
catggcagctgcagtggcaacaaagaggagtgtctgctctgggtagataagtacaagccc
acctcactcaagagcataatcggacagcagggggaccagagctgtgccaacaaactgcta
cgctggctcagaaactggcacaagagttctgaagagaaaaaacatgcagcaaagtctggc
aaacttgccagcaaagatgatggctcaagtttcaaggcagcattgctgtctggccctcca
ggggttggcaaaaccactacagcttctcttgtgtgtcaggaattgggctacagttacatg
gaactaaatgcaagtgatactcggagtaagaacagtttgaaagcaattgttgctgaatct
ttgaacaacaccagcatcaaaggcttttatacaagtggagcagctccttccgtgagcgcg
aggcatgctctcatcatggatgaggtcgatggcatggctggcaatgaggacaggggtgga
gttcaggagctaataggcctgataaagcacactaaaattcccatcatttgtatgtgcaat
gatagaaatcaccccaaaattcgctcattggttcattattgttttgatcttcgtttccaa
agacctcgagttgaacagattaagagtgcaatgctgtctattgcatttaaagagggtcta
aagatcccccctccagctatgaatgaaataattttgggagctaatcaagatgtcagacag
gttttacacaatctcagtatgtggtgtgcacaaagtaaggccctaacctatgaccaagcc
aaggccgattctcaaagggccaagaaggatatcagactgggcccatttgatgtggcacgg
aaagtgtttgcagctggagaggagactgcacacatgtcactgatggacaagtcggatctc
tttttccatgactattccatagcacctctctttgtccaggagaactacctccatgtaaag
cctgtggctgcagggggtgacatgaagaagcacttgatgcttttaagccgggcagcagat
agcatatgtgatggtgacttagtggacagtcagattcggagtaagcaaaactggaatctt
ctgcccacacaggccatttatgccagtgttcttcctggagaattgatgaggggctacatg
actcagtttccaagcttcccaagctggctggggaaacattcgtctacgggcagacatgat
cggattgttcaggacctatccttgcacatgagccttagaacttactccagcaaaaggaca
gtgaacatggattacctgtcacacatcagagacgcacttgtacgacccttgacctcacaa
ggggtagaaggggttcagcatgttgtcacacttatggacacatactatttgatgaaagaa
gattttgagaacatcatggaagttagcagctgggggggcaagcccagtgccttttccaag
ctggatcccaaggtgaaagcagccttcacgagagcctacaataaggaggcccacctgacc
ccgtactcactgcaggcagtaaagacatcgaggctcagcacaggcccagcactggattcc
gaatatagtgaggagttacaggaagatgacgctcagtctgatgagaaagagcaggatgca
gtagagaccgacgccatgatcaagcagaaaaagacaagatcttcaaagccttcaaaatca
gaaaaagagaaggagtccaaaaaaggaaaagggaaaaattggaagaaatga
DBGET
integrated database retrieval system
