Mastomys coucha (southern multimammate mouse): 116071260
Help
Entry
116071260 CDS
T07224
Symbol
Pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc01521
EGFR tyrosine kinase inhibitor resistance
mcoc04010
MAPK signaling pathway
mcoc04014
Ras signaling pathway
mcoc04015
Rap1 signaling pathway
mcoc04020
Calcium signaling pathway
mcoc04072
Phospholipase D signaling pathway
mcoc04144
Endocytosis
mcoc04151
PI3K-Akt signaling pathway
mcoc04510
Focal adhesion
mcoc04540
Gap junction
mcoc04630
JAK-STAT signaling pathway
mcoc04810
Regulation of actin cytoskeleton
mcoc05163
Human cytomegalovirus infection
mcoc05200
Pathways in cancer
mcoc05206
MicroRNAs in cancer
mcoc05214
Glioma
mcoc05215
Prostate cancer
mcoc05218
Melanoma
mcoc05230
Central carbon metabolism in cancer
mcoc05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
116071260 (Pdgfra)
04015 Rap1 signaling pathway
116071260 (Pdgfra)
04630 JAK-STAT signaling pathway
116071260 (Pdgfra)
04072 Phospholipase D signaling pathway
116071260 (Pdgfra)
04151 PI3K-Akt signaling pathway
116071260 (Pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116071260 (Pdgfra)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116071260 (Pdgfra)
05206 MicroRNAs in cancer
116071260 (Pdgfra)
05230 Central carbon metabolism in cancer
116071260 (Pdgfra)
05231 Choline metabolism in cancer
116071260 (Pdgfra)
09162 Cancer: specific types
05214 Glioma
116071260 (Pdgfra)
05218 Melanoma
116071260 (Pdgfra)
05215 Prostate cancer
116071260 (Pdgfra)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
116071260 (Pdgfra)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
116071260 (Pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mcoc01001
]
116071260 (Pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcoc04090
]
116071260 (Pdgfra)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116071260 (Pdgfra)
Protein kinases [BR:
mcoc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116071260 (Pdgfra)
CD molecules [BR:
mcoc04090
]
Proteins
116071260 (Pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
DUF3475
C1-set
Kinase-like
C2-set_2
Motif
Other DBs
NCBI-GeneID:
116071260
NCBI-ProteinID:
XP_031198592
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MLLLIVPDSGAMGTSHQAFLVLSCLLTGPSLISCQLLIPSILPNENEKIVQLNSSFSLRC
FGESEVSWQHPMSEEEDPNVEIRNEENNSGLFVTVLEVVNASAAHTGWYTCYYNHTQTEE
SEIEGRHIYIYVPDPDMAFVPLGMTDSLVIVEEDDSAIIPCRTTDPETQVTLHNNGRLVL
ASYDSRQGFNGTFSVGPYICEATVKGRTFKTSEFNVYALKATSELNLEMDARQTVYKAGE
TIVVTCAVFNNEVVDLQWTYPGEVRNKGITMLEEIKLPSIKLVYTLTVPKATVKDSGEYE
CAARQATKEVKEMKRVTISVHEKGFVEIKPTFGQLEAVNLHQVREFVVEVQAYPTPRISW
LKDNLTLIENLTEITTDVQKSQETRYQSKLKLIRAKEEDSGHYTIIVQNDDDLKSYTFEL
STLVPASILELVDDHHGSGGGQTVRCRAEGTPLPDIDWMICKDIKKCNNDTSWTVLASNV
SNIITESHRRGRSTVEGQVSFAKVEETIAVRCLAKNSLGIGSRELKLVAPTLRSELTVAA
AVLVLLVIVIVSLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFP
RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMT
HLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFMSRHPEKPKKDLDIFG
LNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYK
KKSVLDSEVKNLLSDDDSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG
KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSFGILLWEIF
SLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVQCWNSEPEKRPSFYHLSEI
VENLLPGQYKKSYEKIHLDFLKSDHPAVARMRVDSDNAYIGVTYKNEEDKLKDWEGGLDE
QRLSADSGYIIPLPDIDPVPEEEDLGKRNRHSSQTSEESAIETGSSSSTFIKREDETIED
IDMMDDIGIDSSDLVEDSFL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcttctactgatagtaccagactcaggagctatggggacctcccaccaggcctttctg
gtcctcagctgtctcctcacagggccgagcctcatctcctgccagctcttaataccctct
atcctccccaatgagaatgagaagattgtgcagctgaattcgtccttttctctgagatgc
tttggggagagtgaagtgagctggcagcaccccatgtctgaagaagaggaccccaacgtg
gaaatcagaaatgaggagaacaacagtggcctctttgtcacagtgctggaagtagtcaac
gcctcagcggcccacaccggatggtacacttgctattacaaccacactcagaccgaagag
agtgagatcgaaggcagacacatttacatctatgtaccagacccagacatggcctttgtg
cctctcgggatgacggattctttagtcatcgtggaagaggatgattctgccatcatacct
tgccgcaccacagacccggaaactcaagtcaccttgcacaataacgggaggctggtgctt
gcctcctatgacagcaggcagggtttcaatgggaccttcagtgtggggccttacatctgt
gaggccacggtcaaagggaggacgttcaagaccagcgagtttaacgtttatgccttgaaa
gcaacatcagaactgaatctggaaatggacgcacgccagaccgtgtataaggcaggagaa
acaatcgtggtgacctgtgctgtctttaacaatgaggtcgttgacctgcagtggacttac
cctggagaagtgagaaacaaaggcatcaccatgttggaggagatcaaacttccgtccatc
aaactggtgtacactttgaccgtccccaaggccacggtgaaggacagcggagaatatgaa
tgcgctgcccgtcaggccacaaaggaggtcaaggaaatgaagagagtcaccatttctgtc
cacgagaaaggcttcgttgagatcaagcccacttttggccagctggaagctgtcaacttg
catcaagtcagagagttcgtggtggaggtgcaggcctacccgacgcccaggatatcctgg
ctgaaagacaacttgactctgatagagaatctcaccgagatcaccacggacgtacagaag
agccaggaaacaaggtatcaaagcaaattaaagctgattcgggctaaggaagaggacagt
ggccactacaccatcatagtgcaaaatgacgacgacctgaagagttacacattcgagctg
tcgactctagttcctgcatccattctggagctcgtggatgaccaccatggctctggcggg
ggacagactgtgaggtgcagagctgaaggcacccctcttccggacattgactggatgatc
tgcaaggatattaaaaaatgtaataatgacacttcatggacagttttggccagcaatgtc
tcgaatattatcacggagtcccatcgccgaggcaggagtactgtggagggacaggtgtcc
ttcgccaaagtggaagagaccatcgcagttcggtgcctggcaaagaacagcctgggcatt
gggagccgtgagctgaagttggtggctcccaccctgcgatctgaactcacggtggcagcg
gcggtgcttgtgctgttggtgattgtcatcgtctctctcattgtcctggtcgtcatttgg
aagcagaaaccacggtatgaaattcgctggagggtcatcgagtcaatcagccccgatgga
cacgagtatatttatgtggaccccatgcagctgccttacgactcccgatgggaattcccg
agagatggactagtccttggtcggatcttgggatctggtgcctttgggaaagtggttgaa
ggcacagcttatggattaagccggtcccagcctgtaatgaaggtggctgtgaagatgctc
aaacccacagctaggtctagtgaaaagcaagctctcatgtctgagctaaagataatgact
cacttgggaccacatttgaacattgtgaacttgctgggagcctgcaccaagtcaggcccc
atttacatcatcacagaatactgcttctatggggatttagtcaactatttgcataagaac
agagatagcttcatgagccgacacccagagaagccgaagaaagacctggacatctttgga
ttgaatcctgcagatgagagtacaagaagttatgtgattttgtcttttgaaaataacggc
gactacatggacatgaagcaagctgataccacacagtatgtccccatgcttgagaggaaa
gaggtttctaagtactctgacatccagagatcgctgtatgatcggccagcctcctataag
aagaaatccgtgctagactcagaagtaaaaaacctcctttcggatgatgactccgagggt
ctgactttgctggatttattgagcttcacctatcaagttgcccgaggaatggaatttttg
gcttcaaaaaattgtgtccaccgggacctggctgcccgcaatgtcctcctggcgcagggg
aaaattgtgaagatctgcgattttggcctggccagagacatcatgcacgattctaactac
gtgtcaaaaggcagtaccttcctgcctgtgaagtggatggcaccagagagcatcttcgac
aacctctataccacgctgagtgacgtctggtcttttggcattctgctctgggaaatcttc
tctcttggtggcacaccctaccctggcatgatggttgattctactttctacaataagatc
aagagtggataccggatggctaaacctgaccatgccaccagtgaagtctatgagatcatg
gtgcagtgctggaacagtgagcctgagaagagaccctccttctaccacctcagcgagata
gtggagaatctgttgcctggacaatacaagaagagttatgaaaagattcacctggacttc
ctaaagagtgaccacccggctgtggcacgcatgcgtgtggactctgataatgcgtacatc
ggtgtcacttacaaaaatgaggaggacaagctgaaagactgggaaggtggcctggacgaa
cagagactgagtgcagacagtggctacatcattcctctgccagacattgatcctgttcca
gaggaggaagacctgggcaagaggaacagacacagctcgcagacttcggaagagagtgcc
attgagacaggttccagtagttccaccttcatcaagagagaggatgagaccatcgaggac
atcgatatgatggatgatattggtatagattcctccgacctggtggaggacagcttcctg
taa
DBGET
integrated database retrieval system
