Mastomys coucha (southern multimammate mouse): 116071262
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Entry
116071262 CDS
T07224
Symbol
Lnx1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX isoform X1
KO
K10692
ligand of Numb protein X 1/2 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116071262 (Lnx1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116071262 (Lnx1)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116071262 (Lnx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
116071262
NCBI-ProteinID:
XP_031198599
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MNQPDLADDPDPSPEPLCVVCGQNHSPEENHFYTYTDDVDDDLVCHICLQALLDPLDTPC
GHTYCTLCLTNFLVEKDFCPVDRKPVVLQHCKKSSILVNKLLNKLLVTCPFTEHCTEVLQ
RCDLQHHFQTSCKGASHYGLTKDRKRRSQDGCPDGCASLTATTLSPEVSAAATISLMTEE
PGLDNPAYVSSVEEGEPVTNSSDSGRSNRTRARPFERSTMRSRSFKKINRALSALRRTKS
GSVVANHADQGRDNSENATVPEVFPRLFHLIPDGEITSIKINRADPNESLSIRLVGGSET
PLVHIIIQHIYRDGVIARDGRLLPGDIILKVNGMDISNVPHNYAVRLLRQPCQVLRLTVL
REQKFRSRSNAQAPDSYGPRDDSFHVILNKSSPEEQLGIKLVRRVDEPGVFIFNVLNGGV
ADRHGQLEENDRVLAINGHDLRFGSPESAAHLIQASERRVHLVVSRQVRQPSPDIFQEAG
WISNGQRSPGPGERSTSSKPAATCHEKVVSVRKDPSESLGMTVGGGASHRDWDLPIYVIS
VEPGGVISRDGRIKTGDILLNVNGIELTEVSRTEAVAILKSTSSSVVLKALEVKEEETQE
DCSPAALDSNHNVTPPGDWSPSWVMWLELPQYLYNCKDVILRRNTAGSLGFCIVGGYEEY
SGNKPFFIKSIVEGTPAYNDGRIRCGDVLLAVNGRSTSGMIHACLARMLKELKGRITLTI
ASWPGTFL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaccagaccttgcggacgacccagatcccagccccgagcccctgtgcgtcgtg
tgtggccaaaaccactccccggaggaaaaccacttctacacatacacagatgatgtagac
gacgacctcgtatgccacatctgcctgcaagcattgctggaccctctggacactccgtgc
ggacacacctactgcaccctgtgcctcaccaacttcctggtggagaaagacttctgccct
gtggatcgaaagcctgtggtgctgcagcattgtaagaaatccagcatcttggtcaataag
cttctcaacaagctgttggtcacctgcccattcacagagcactgcaccgaggtgctacag
cgatgcgatctccagcatcatttccagacaagctgcaaaggggcctctcactatggcctg
accaaggacaggaaaaggcgctcacaagatggctgtcctgatggttgcgccagcctcacg
gcaacgacgctctccccagaggtttctgcagctgccaccatctctttaatgacagaggag
cctggcctggacaaccctgcctacgtgtcctcagtggaggagggtgaaccggtaaccaac
tcctcagactctggccggagcaaccggactagggcacggccctttgagcgctccactatg
agaagccgatctttcaagaagatcaaccgagctctgagtgctctccggaggacgaagagc
gggagtgtcgttgccaaccatgctgaccagggcagggacaactctgagaacgccactgtc
cccgaagtcttcccgaggttgtttcacctgattccagatggtgaaattacaagcatcaaa
atcaatagagcggatcccaacgaaagcctctccataaggcttgtgggaggcagcgagacc
ccgctggtccacatcatcatccaacatatttatcgtgatggagtgattgccagagatgga
cgactgctgccaggagacatcattctcaaggtcaatggcatggacatcagcaatgttcct
cataactatgccgtgcggctcctgcggcagccctgccaggtgctacggctaacggtgcta
cgggagcagaagttccgtagcagaagcaatgcgcaggcgccggactcctacggaccccgg
gatgacagcttccacgtaatcctcaacaaaagcagcccggaggagcagcttggcataaag
ctggtgcgcagggtggatgagcccggcgtgttcatcttcaacgtgttgaatggtggtgtt
gccgaccgacacggccagctggaagagaatgatcgtgtgttggccatcaacggacatgac
cttcgatttggcagtcccgagagtgcagctcatctgattcaggccagtgaaagacgtgtt
catctcgtcgtgtcccgccaggttcgacagcccagcccagacatctttcaagaagctggc
tggatcagcaatggccagcggtccccaggcccaggggagaggagcacatcttctaagcct
gcagccacttgtcatgagaaggttgtaagtgtccgaaaagaccccagcgaatctctcggc
atgactgttggagggggagcatcccacagggactgggacttgcctatctatgtcatcagt
gttgagcctggaggagtcataagcagagacggaagaataaaaacaggtgacattttattg
aatgtgaatgggattgagctcacagaggtcagccggacagaggccgtggccatactgaag
agcacgtcctcctcagtggtactcaaagccttggaagtcaaggaagaggagacccaggaa
gactgcagcccagcagccctggactccaaccacaatgtgaccccgcctggtgactggtcc
ccatcctgggtcatgtggctggaattaccacagtacttatataactgtaaagatgtgatc
ctacgaaggaacacagctggaagtctgggcttctgcattgtgggaggctatgaagaatac
agtggtaacaaaccattttttatcaagtccattgttgaaggaacacccgcatacaatgat
ggaagaatcagatgtggtgacgttcttctcgctgtcaacggtagaagtacatcgggtatg
atacatgcttgcttggcaaggatgctcaaagaacttaaggggagaattactctcaccata
gcttcttggcctggtacttttttataa
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integrated database retrieval system
