Mastomys coucha (southern multimammate mouse): 116071263
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Entry
116071263 CDS
T07224
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116071263 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116071263 (Fip1l1)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116071263 (Fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
116071263
NCBI-ProteinID:
XP_031198605
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MSAGEVERLVELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANPP
SGIEEEAAENGVAKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLN
IKAGGRVYGNTGTKVKGVDLDAPGSVNGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFN
EDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGRT
GNSEKEAALPSTKAEFTSPPSLFKTGLPPSSRNSTSSQSQTSTASRKASSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSDRSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLTSSAPSWPSLVDTTKQWDYYARREKDRDRDRERDRDR
ERERDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHR
ERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPVQEQESTE
AAPAE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtggagcgcctggtggagctgagcggcgggaccggaggggatgag
gaggaagagtggctgtatggcggcccgtgggacgtgcatgtgcacagtgatttggcaaag
gatctagatgagaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcctcca
tctggaattgaagaggaagctgctgaaaatggcgtggcaaaaccgaaagtgacagagact
gaagacgacagtgatagtgacagtgacgatgatgaagatgacgttcatgtcactattgga
gacatcaaaacgggagcaccacagtatgggagttatggaacagcaccagtaaatcttaat
atcaaggcagggggaagagtttatggaaatacaggaaccaaagtcaaaggagtggacctc
gatgcgcctggcagtgttaatggagtgccactcttggaggtagatttggattcttttgaa
gataaaccatggcggaaacctggtgccgatctttctgattattttaattatggctttaat
gaagacacttggaaagcttactgtgaaaaacagaagaggatacgaatggggctggaagtt
atacctgttacttcaaccacaaacaagattacggccgaagactgtactatggaagttaca
ccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcaagggagaact
ggaaattcagagaaggaagcagcacttccatctacaaaagctgagtttacttctccacca
tcattgttcaagactggtctgccaccaagcagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccagttcaagcgttgggaagtggcaggatcgatatggg
agggccgagtcacctgatctaaggagattacctggagcaattgatgtcattggtcagaca
ataaccatcagcagagtagaaggaagacggcgtgcaaatgagaacagcaatatccaggtc
ctttctgacagatctgccactgaagtagacaacaatttcagcaaaccacctccatttttc
cctccaggggctcctcctactcacctccctcctcctccatttctcccacctcctccaacg
gtcagcactgcccctcctctcatcccaccgccaggtattccaataactgtaccacctcca
ggtttcccccctccaccaggcgctccacctccatctcttataccaacaatagaaagtggc
cattcctctggttatgacagccgttctgcacgagcatttccgtatggcaatgttgccttt
ccccaccttaccagttctgctccttcatggcctagccttgtggacaccaccaagcagtgg
gactattatgcacggagagaaaaagatcgagatcgagacagagagcgagaccgggacaga
gagcgagagcgagaccgggacagagaaagggagcgcacccgggagcgggagcgggagcgg
gaccacagccccaccccaagtgttttcaacagtgatgaagaacgatacagatacagggag
tatgcagagagaggctatgagcgccatagagctagtcgggagaaagaagagcggcacaga
gaacgacgtcacagagagaaggaggagacaagacacaagtcttctcgcagtaatagtaga
cgtcgtcatgaaagtgaagaaggggacagtcacagaagacacaagcacaaaaaatctaaa
agaagcaaagaaggaaaagaggccggcagtgagccggtccaggagcaggagagcaccgaa
gctgcccctgccgagtag
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