Mastomys coucha (southern multimammate mouse): 116071323
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Entry
116071323 CDS
T07224
Symbol
Polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03020
RNA polymerase
mcoc03420
Nucleotide excision repair
mcoc05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116071323 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
116071323 (Polr2b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
116071323 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116071323 (Polr2b)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116071323 (Polr2b)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116071323 (Polr2b)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116071323 (Polr2b)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116071323 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
116071323
NCBI-ProteinID:
XP_031198688
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgccgacgaggatatgcaatatgatgaggatgatgatgaaatcactccggat
ttgtggcaggaagcatgctggatcgtaatcagttcttactttgatgaaaaaggcttggtc
agacaacagctggactcctttgatgagtttattcagatgtctgttcaaagaattgtggaa
gacgcgccgccgatagacctgcaggctgaagctcagcatgctagtggggaagttgaagag
ccgccaagatatttactgaagtttgaacaaatttacctctccaaacctactcattgggaa
agagatggtgccccttcacctatgatgccgaatgaagccaggttaagaaatcttacgtac
tccgctccactttatgttgacataacaaagacggtcattaaagaaggtgaggagcagctg
cagactcagcaccagaaaactttcatagggaaaataccaattatgctgcgctccacatac
tgcctgttgaatggcttaacagatcgtgacctgtgtgagctgaatgagtgtcctttggat
cccggtggctattttattatcaatggatcagaaaaggttctgatagctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattccaagtatgcctatacaggagaa
tgtcgttcatgcctggagaattcttcccgaccaaccagtactatatgggttagcatgctg
gccagaggaggacagggtgcaaagaagagtgctattggccagcgcattgtggcgacgtta
ccatacatcaagcaagaagttcccatcatcatcgtgttcagagcattaggctttgtgtct
gatagagatattttagaacacatcatttatgacttcgaagatccagagatgatggaaatg
gttaaaccatctctcgatgaagcatttgtcatccaagagcagaatgttgccttaaacttc
atcggttcaagaggggcaaagccgggtgttactaaggaaaaaagaattaaatatgcaaaa
gaagtcttacagaaagaaatgctccctcatgttggtgtcagtgatttctgtgagaccaaa
aaggcctatttcttgggatacatggttcataggttacttctagcagctttgggcagaaga
gaactagacgacagagatcactatggcaacaagagattggatcttgctgggcctctgctt
gcattcttatttagaggcatgtttaagaatttactgaaagaagtacgaatctatgcacag
aagtttattgatcgcgggaaagactttaacttagagctggcaattaagacaaggatcata
tctgatgggctaaaatattctttagccactgggaactggggtgaccagaagaaagctcat
caagccagagctggagtgtcccaggtattgaaccgcctgacttttgcatccactctttct
cacctgcgtcgtctaaactctcctattggcagagatggcaagctagcaaagcccagacag
ctgcataatacattgtggggaatggtgtgtcctgctgaaactccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagtaggatctcaaccctctcca
attttggaatttttagaagaatggagcatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatccataaagacccc
gaacagctcatgaacacgctaaggaaattacggcggcagatggacatcattgtatctgaa
gtttctatgatcagagatatccgagagcgggagatccggatctacacggacgcaggccgc
atctgtagacctcttctgatcgtggaaaagcagaagcttcttttgaagaagagacacatt
gaccagttgaaagagagagagtacaacaactacagttggcaggatctggtagccagtggg
gtagttgaatatattgataccctggaggaggaaaccgtgatgcttgcaatgactccagat
gatttgcaggagaaagaagtagcttattgttctacctacacccactgtgagattcaccca
tcaatgattcttggcgtctgtgcatctattattccttttcctgatcataaccagtcccct
agaaacacataccagtctgctatgggcaagcaggctatgggagtttatatcaccaacttc
catgtgcgaatggacacgttggcccatgttctctactatcctcagaaaccccttgtgact
acacggtctatggaatatctacggtttagagagctgccagcaggaatcaactcaattgtg
gccattgcttcatacaccggctataatcaagaagactctgttatcatgaatcgttcagct
gtggatcgaggctttttcaggtctgttttctaccgatcatacaaagaacaagagtctaaa
aaaggatttgatcaagaagaagtgtttgagaagcctacacgtgaaacatgccagggtatg
aggcatgccatttatgacaagttggacgacgatggtttgatagctccgggggttcgagtc
tcaggagatgatgttattatagggaaaacagtcaccttacctgagaatgaggatgagctg
gagagcaccaacaggcgctacaccaagagggactgtagcacgttcctcagaactagtgag
acaggcattgtggaccaggttatggtcactctcaaccaggaaggatataaattttgtaaa
ataagggtacgctctgttagaattccgcagattggagacaaatttgctagtcgacatggt
cagaagggtacttgtggtattcagtatagacaagaggacatgccgttcacttgtgaaggc
ataactcctgacatcatcataaacccccacgccatcccctctcggatgacgattggtcac
ttgatcgaatgtctccaagggaaggtctctgccaacaagggtgaaattggtgacgccacg
ccgtttaatgatgctgtcaatgtgcagaagatttctaatcttttatctgactatggctac
catctcagaggaaatgaggtactctataatggattcactggtcgaaaaatcacatcacag
atttttattggccccacttactaccagcgtttgaagcatatggtggatgacaaaattcat
tctcgtgctaggggacccattcagattcttaatagacagcccatggagggtagatctcgt
gatggtggcctgcgctttggagaaatggaacgagactgtcagattgcccatggtgcagca
cagtttttaagagaaaggctgtttgaagcatcagatccatatcaggttcatgtttgtaat
ctttgtggaataatggcaattgctaacaccaggactcatacgtatgaatgcaggggatgc
cgcaataaaacccagatttctttggtgcgaatgccctatgcatgcaagcttttgttccag
gagctcatgtccatgagcatcgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
