Mastomys coucha (southern multimammate mouse): 116071911
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Entry
116071911 CDS
T07224
Symbol
Nectin1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03266
Virion - Herpesvirus
mcoc04514
Cell adhesion molecules
mcoc04520
Adherens junction
mcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116071911 (Nectin1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116071911 (Nectin1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116071911 (Nectin1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116071911 (Nectin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116071911 (Nectin1)
04090 CD molecules [BR:
mcoc04090
]
116071911 (Nectin1)
Cell adhesion molecules [BR:
mcoc04515
]
Immunoglobulin superfamily
Nectin family
116071911 (Nectin1)
CD molecules [BR:
mcoc04090
]
Proteins
116071911 (Nectin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Motif
Other DBs
NCBI-GeneID:
116071911
NCBI-ProteinID:
XP_031198884
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MARMGLAGAAGRWWGLALGLTAFFLPGTHTQVVQVNDSMYGFIGTDVVLHCSFANPLPSV
KITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSGLELEDEG
MYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRARKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHRQSLACIVNYHLDRFRESLT
LNVQYEPEVTIEGFDGNWYLQRTDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPINYSLAGTYICEATNPIGTRSGQVEVNITEFPYTPTPEHGRRAGQMPTAIIGGVA
GSVLLVLIVVGGIIVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPDD
SDDEKKAGPLGGSSYEEEEEEEGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGYG
DRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgccttcttcctcccaggcactcacacacaggtggtgcaggtgaacgattccatgtat
ggcttcatcggcacagatgtggtactgcactgtagctttgccaacccactgcccagcgtg
aagatcacccaggtcacatggcagaaggcctccaatggctccaagcagaacatggccatc
tacaacccaactatgggtgtttccgtgctgcctccctatgagaaacgagtggagttcctt
cgaccctccttcatcgacggcaccatccgcctttccggcctggaactggaagacgagggc
atgtacatctgtgaatttgctacctttcctacgggcaaccgtgagagccagctcaatctc
actgtgatggccaaacccaccaactggatcgagggcacccaggcagtgcttcgagccagg
aagggacaggatgacaaggtcctggtggccacctgcacctcagccaatggcaaacctccc
agtgtagtgtcctgggaaacacggctaaagggcgaggcagagtaccaggaaattcggaac
cccaatggcacagtgacagtcatcagccgttaccgcttggtgcccagcagggaagcccac
cgacagtccctggcctgcatcgtcaactatcacctggaccgcttcagggagagccttaca
ctcaacgtgcagtatgaacctgaggtgaccattgagggctttgatggcaactggtaccta
cagcggacagatgtgaagcttacgtgcaaagcagatgctaacccgccagccacggagtac
cactggaccacgttgaatggctctctccccaagggtgtagaagcccagaacagaaccctc
ttcttccggggacctatcaactacagcctggcaggaacctacatctgtgaggccactaac
cctattggcacccgatcgggccaggtggaggtcaatatcacagaattcccctacaccccg
actcctgaacatgggcggcgcgcggggcagatgcccacagccatcattgggggcgtggca
gggagtgtcctgctggtgctgattgtggttggagggatcatagtggccctgcgcaggcgc
cggcataccttcaagggtgactacagcaccaagaagcacgtttacggcaacggctacagc
aaagcaggaatcccccaacatcacccgcccatggcacagaacctgcagtacccggatgac
tcggatgatgaaaagaaggccggtcccttgggcgggagtagctatgaagaggaagaggag
gaggagggcggtggaggaggtgaacgcaaggtgggtggcccccaccccaaatatgacgag
gacgccaaacggccctacttcactgtggatgaggctgaggcccgtcaggacggctatggg
gaccggactctgggctaccagtacgaccctgaacagctggacttggctgagaacatggtt
tctcagaacgacggatctttcatttccaagaaagagtggtatgtgtag
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