Mastomys coucha (southern multimammate mouse): 116071955
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Entry
116071955 CDS
T07224
Symbol
Pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03250
Viral life cycle - HIV-1
mcoc03272
Virion - Hepatitis viruses
mcoc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116071955 (Pdcd6ip)
03272 Virion - Hepatitis viruses
116071955 (Pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116071955 (Pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116071955 (Pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcoc04147
]
116071955 (Pdcd6ip)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
116071955 (Pdcd6ip)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Proteins found in most exosomes
116071955 (Pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
AAT
Motif
Other DBs
NCBI-GeneID:
116071955
NCBI-ProteinID:
XP_031198952
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MASFIWVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRSALGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKTAAKQYQFASGAFLHIKDTVLSALSREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKY
FYFQEVFPTLAAKQCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKNVASRYDEYV
NVKDFSDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKPTPVNVPISQKFTDLF
EKMVPVSVQQSLAMFSQRKADVVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDSVPQ
SILTKSTSVVEQGGIQTVDQLIKELPELLQRNREILEESLRLLDEEEATDNDLRAKFKDR
WQRTPSNDLYKPLRAEGAKFRAVLDKAVQADGQVKERYQSHRDTIALLCKPEPELNAAIP
SANPAKTMQGSEVVNVLKSLLSSLDEIKKEREALENDLKSVNFDMTSKFLTALAQDGVIN
EEALSVTELDRIYGGLTSKVQESLKKQEGLLKNVQVSHQEFSKMKQSNNEANLREEVLKN
LATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAR
EPSAPSIPPPAYQSSPAGGHATAPPTPAPRTMPPAKPQPPARPPPPVLPANRVPPAAAAA
APAGVGTASAAPPQTPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYP
PVYHQSPGQAPYPGPQQPTYPFPQPPQQSYYPQQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcatctgggtgcagctgaagaagacctcggaggtggacctggctaagccg
ctggtgaagttcatccagcagacgtatccgagcggcggcgaggagcaggcccagtactgc
cgcgcggccgaggagctcagcaagctgcggcgctcggcgctcggccgcccgctggacaag
cacgagggtgcgctggagacgctgctgaggtattatgatcagatttgttccattgaaccc
aagttcccattttctgaaaatcagatctgcttgacgtttacgtggaaggatgcttttgat
aaaggttccctttttggaggatctgtgaaattggctctcgcaagcttaggatatgagaag
agctgtgtgttgttcaattgtgctgccttagctagccagattgcggcggagcagaacctg
gacaatgatgaaggattgaaaaccgctgctaagcagtaccagtttgctagtggtgccttt
ttacatattaaagacacagtgttatctgccttaagtcgagagcctactgtggacatatct
ccagataccgttgggactctcagccttattatgctggcccaagctcaagaagtatttttc
ttaaaagccacaagagataagatgaaagatgccatcatagctaagctggcaaatcaggct
gcggattactttggcgatgctttcaaacagtgtcagtacaaagatactctccccaagtat
ttttatttccaggaggtattccccaccctggctgcaaagcagtgcatcatgcaggccaat
gctgagtaccaccagtccatcctggccaagcagcagaagaagttcggggaagagatcgca
aggttgcagcatgcagcagaactgattaagaatgtggcctctcgctatgatgaatatgtc
aatgtgaaggatttttctgacaaaatcaaccgtgcccttactgcagcaaagaaagataat
gattttatttatcatgaccgtgttccggaccttaaggatctggatcctatcggcaaagcc
acacttgtgaaacccaccccagtcaatgtacccatcagccagaagttcacggatttgttt
gagaagatggtccccgtgtctgtgcagcagtccctggctatgtttagtcagaggaaagct
gacgtggttaacagatcgatcgctcagatgagagaagctactactttggcaaatggagtc
ttggcttcccttaaccttccagccgcaattgaagatgtgtctggagactctgtacctcag
tctatacttaccaagtctacatctgtagtcgaacagggaggcatccagactgtcgaccag
ctcataaaagagctacctgagctgctacaaagaaacagagagatattagaggagtcgcta
agattgttggatgaagaagaagcaactgataatgacttaagagcaaaattcaaggaccgc
tggcaaaggactccatccaacgacctgtacaagcctttacgagcagagggagccaaattc
agagccgtgttagataaagccgtgcaagcggatggacaagtgaaggagcgttaccagtcc
caccgagataccatcgcacttctgtgtaagccggagccagagctgaatgctgccatcccc
tctgctaacccagcaaagaccatgcagggcagcgaggttgtaaatgtcttaaaatcctta
ttatcaagtcttgatgaaataaagaaggaaagagaggctcttgagaatgacctgaagtca
gtgaattttgacatgacaagcaagtttttgacagctctggcccaagatggagtgataaat
gaggaggctctctctgtcactgagctggatcggatctatggtggtctaacaagtaaagtt
caagagtctctaaagaaacaggagggacttcttaaaaatgtacaggtctcacaccaggaa
ttctccaaaatgaagcagtctaacaatgaggctaacttgagagaagaagttctgaagaac
cttgcaactgcgtatgacaactttgtcgagcttgtagctaacttgaaggagggcacaaag
ttttacaatgagctgactgaaatcctggtcaggttccagaacaaatgcagtgacatagtg
tttgcacggaagacagagagagacgagctcttgaaggatctgcagcagagcattgccaga
gagcccagcgctccttcaatccctcccccagcgtatcagtcctccccagcagggggacat
gcaacagctcctccaactccagccccaagaaccatgccgcctgctaaaccccagcctcca
gcccggcctccaccccctgtgcttcctgcaaaccgagttcctcctgctgcagctgctgct
gcccctgcaggcgtggggactgcttcagcagcgccgccacagacccctggctctgctccc
cctccacaggctcagggaccaccataccctacctatccaggatatcccgggtattgccaa
atgcccatgcccatgggctacaacccttacgcatatggccagtacaatatgccgtaccca
ccggtgtatcaccagagccccggacaggctccatacccaggaccccagcagcctacctac
cccttccctcagcccccgcagcagtcctactatccacagcagtaa
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