KEGG   Mastomys coucha (southern multimammate mouse): 116072027
Entry
116072027         CDS       T07224                                 
Symbol
Wdr61
Name
(RefSeq) WD repeat-containing protein 61 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116072027 (Wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116072027 (Wdr61)
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     116072027 (Wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_TEP1_C eIF2A Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT140_1st Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Ge1_WD40 Beta-prop_Nup120_160 Cytochrom_D1 PROPPIN Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 WD_LRWD1 WDR54 VPS8_N Beta-prop_RIG_1st WD40_like GSDH Beta-prop_IFT122_2nd Nucleoporin_N DUF2415
Other DBs
NCBI-GeneID: 116072027
NCBI-ProteinID: XP_031199073
LinkDB
Position
Unknown
AA seq 305 aa
MTNQYSILFKQEQAHDDAIWSVAWETNKKENVETVVTGSLDDLVKVWKWRDERLELQWSL
EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQY
LATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF
CPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHV
YDCPI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccaaccagtacagtattctcttcaagcaagagcaagcccatgatgatgccatatgg
tctgttgcctgggagacaaacaaaaaggaaaatgttgaaacagtggtcacaggatccctg
gatgacctggtgaaggtctggaaatggcgtgatgagaggctggagctccagtggagcctg
gagggacatcagctcggggtggtgtctgtggacatcagccacacccttcccattgctgca
tccagctctctagacgctcatattcgcctctgggatttggaaaatggcaaacagatgaag
tctatagatgcaggaccagtggatgcctggactttggcattctctcctgactcccagtat
ctggccacaggaacacacatggggaaagtgaacatttttggtgtggaaagtggaaaaaaa
gaatattctttggacactagaggaaaattcatccttagtattgcatatagtcctgatggg
aaatacctggccagcggagccatagacgggatcatcaatatttttgacattgcaactgga
aagcttctgcatacgctggaaggccatgcgatgcccattcgttccttgaccttttcccct
gactcccagctcctcgtcacggcttcagatgatggctacatcaagatctatgatgtacaa
catgccaatttggctggcacgttgagtggccatgcatcctgggtgttgaatgttgcgttc
tgtcctgatgacactcactttgtttccagttcatctgacaaaagtgtaaaggtttgggat
gttggaacaaggacctgtattcacaccttctttgatcatcaggatcaggtttggggagta
aaatataacggaaatggatcaaaaattgtatctgttggagatgaccaggaaattcatgtc
tatgactgcccaatttaa

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