Mastomys coucha (southern multimammate mouse): 116072277
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Entry
116072277 CDS
T07224
Symbol
Lingo1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116072277 (Lingo1)
Membrane trafficking [BR:
mcoc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116072277 (Lingo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
116072277
NCBI-ProteinID:
XP_031199498
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MQVSERMLAGGMRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIG
TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGN
LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
CRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
KSDAGISSADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcgagaggatgctggcagggggtatgagaagcatgcccagccccctcctg
gcctgctggcagcccatcctcctgctggtactgggctctgtgctgtcaggctctgccaca
ggctgcccgccccgctgcgagtgctcagcgcaggaccgagccgtgctctgccaccgcaag
cgctttgtggcggtgcccgagggcatccccacggagactcgcctgctggacctgggcaaa
aaccgcatcaagacactcaaccaggacgagtttgccagcttcccacacctggaggagcta
gagctcaatgagaacatcgtgagcgccgtggaaccgggcgccttcaacaacctcttcaac
ctgaggacgctggggctccgcagcaaccgcctgaagctcatcccgctgggcgttttcacc
ggcctcagcaacttgaccaagctggacatcagtgagaacaagatcgtcatcctgctagac
tacatgttccaagacctatacaacctcaagtcgctggaggtcggcgacaatgacctcgtc
tacatctcccaccgagccttcagtggcctcaacagcctggaacagctgacgctggagaaa
tgcaatctgacctccatccccaccgaggcgctctcccacctgcacggcctcatcgtcctg
cggctacgacatctcaacatcaatgctatcagggactactccttcaagaggctgtaccga
ctcaaggtcttagagatctcccactggccctacctggacaccatgacccccaactgcctc
tacggcctcaacctgacatccctatccatcacacactgcaacctgacagccgtgccctat
ttggcagtgcgccacctggtctatctccgtttcctcaacctttcctacaaccccatcggt
acaatcgagggctccatgctgcatgagctgctgcggttgcaggagatccagctggtgggc
gggcagctggccgtggtggagccctatgcctttcgtgggctcaactacctgcgtgtgctc
aatgtctctggcaaccagctgaccaccctggaggagtcagccttccactcagtgggcaat
ctggagacgctgatcctggactccaacccactggcctgtgactgccggctactgtgggtg
ttccggcgccgctggcggctcaacttcaacaggcagcagcccacctgcgccactcctgag
ttcgtccagggcaaggagttcaaggactttccagatgtgctcctacccaactacttcacc
tgccgccgggcccacatccgggaccgcaaggcacagcaggtgtttgtagacgagggccac
acggtgcagtttgtatgccgggcagatggcgaccctccaccagctatcctttggctctca
ccccgcaagcacttggtctcggccaagagcaatgggcggctcacagtcttccctgatggc
acgctggaggtgcgctacgcccaggtacaggacaacggcacgtacctgtgcattgcggcc
aatgctggcggcaacgactccatgcccgcccacttgcatgtgcgcagctattcgcctgac
tggccccatcaacccaacaagaccttcgccttcatctccaaccagccaggcgagggagag
gccaacagcacccgcgccactgtgcctttccccttcgacatcaagacgctcattatcgcc
accaccatgggcttcatctccttcctgggcgttgtcctattctgcctggtgctgctgttt
ctatggagccggggcaaaggcaacacaaagcacaacatcgaaattgagtatgtgccccgg
aaatcggacgcaggcatcagctcagctgatgcaccccgcaaattcaacatgaagatgata
tga
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