Mastomys coucha (southern multimammate mouse): 116072667
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Entry
116072667 CDS
T07224
Symbol
Zc3h12c
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116072667 (Zc3h12c)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
116072667 (Zc3h12c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
DUF3723
Motif
Other DBs
NCBI-GeneID:
116072667
NCBI-ProteinID:
XP_031200015
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MEAGPGAAEGNGPTAVILPLGPSRARGEYGVLCIQEYRKSSKVESSARNSFMGLKGHLGH
DLGHLYMESADPQISAAVPCPMVEKPTMDTVNAGKEGKGVSEENVSSGDSEESTSSDHES
EQLSSLSIEPCLLTKTHRQLCRSPCLEPHLLKHSDILQDFKPEESQTPSKEVKKPPDVVR
EYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKSEADQTVSTINSVMR
ETSSLESQRSESPMQEIVIDDGENLRPVVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLER
GHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIV
KLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDN
FLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTTN
EGGLVKSNSVPCSTKADSTSDVKRGAPKRQSDPSIRTHVYQDVEEKLPTKNKLETRSVPS
LVSIPATSTAKPQSTTSLSNGLPSGVHFPPQDQRPQGQYPPMMMATKNHGTPMPYEQYPK
CDSPVDVGYYSMLNAYSNLSISGPRSPERRFSLDTDYRVNSVASDCSSEGSMSCGSSDSY
VGYNDRSYVSSPDPQLEESLKCQHMHPHSRLNSQPFLQSFHDPLTRVQSYSHEEPKFHPK
RPLPHLAMHLQHPAVGARSSCPGDYPSPPSSAHSKAPQLGRSLVATRIDSISDSRLYDSS
PSRQRKPYSRQEGPGSWDRPSYGMDAYGYRQTYSLPDNSTPPCYESITFQSLPEQQEPTW
RIPYCGMPHDPPRYQDNREKIYINLCNIFPPDLVRLVMKRNPHMTDAQQLAAAILVEKSQ
LGY
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggcccgggcgccgccgagggaaacggacccacggctgtgatcctgcctctc
ggaccctcgcgcgctcgtggggaatacggggtgctttgcattcaagaatacaggaaaagc
agcaaagtggagtcaagtgcacggaacagcttcatgggcttgaagggtcacctggggcat
gaccttggccacctttatatggagagcgctgacccacagataagtgcagctgtgccttgc
cctatggtagagaaaccaacaatggatacagtcaatgcagggaaggaaggaaaaggggtg
tctgaagagaatgtgagctctggtgactctgaggaaagcacgagttctgatcatgagtca
gaacaactgagtagcctttcaatagagccatgcttattaaccaagactcacagacagtta
tgtcgctctccctgcttagagcctcacctactgaaacacagtgacattttgcaagacttt
aaaccagaagagtcccagactccatccaaggaagtgaagaaaccccctgatgtggttcga
gaataccaaacaaaactggagtttgcacttaagttaggttattctgaagaacaggtccag
cttgtgctaaacaaacttggtactgatgctttaatcaatgatatattgggagaacttgtc
aaacttggaaataaaagtgaagctgatcaaacagttagtactattaacagtgtaatgcga
gaaacatcatccctggaatctcagaggtctgaatctccaatgcaagagattgtaatagat
gatggtgaaaatctgagaccagtagttattgatggcagcaacgtggcaatgagccatgga
aacaaagaagtattctcgtgccgaggaataaaattggcggtggattggtttttggaaaga
ggccacaaagatattacagtctttgttcctgcttggagaaaagagcagtccaggcctgac
gcccttatcacagatcaggaaattttacgtaaactagagaaggaaaaaatcctggtattc
acaccatcgcggcgcgtccagggcaggcgggtggtgtgctacgacgacaggttcatcgtg
aagctggcttttgagtctgatggtataattgtgtccaatgataactacagagatttggcg
aatgaaaaaccagaatggaagaagttcatagatgaacggttattgatgtattcctttgtc
aatgacaagttcatgcccccggatgaccctcttggcagacatggcccaagtctggataat
tttctgaggaagaaacccattgttcctgagcacaaaaagcagccttgtccctatggaaag
aagtgtacgtatggacacaagtgcaaatattaccacccagaaaggggcagtcagcctcag
cggtcagtggctgatgaacttcgtgccatgtctagaaacacagcagccaaaactacaaat
gaagggggactggtgaaaagcaacagtgttccttgtagcaccaaggctgatagcacttcg
gatgttaaacggggtgctccaaagaggcagtcagacccaagcataaggactcacgtctac
caagacgtagaggaaaagcttcccaccaaaaacaagttggaaaccaggtctgtaccttcc
ttagttagtatcccggccacttctactgcaaaaccccaaagcactacatctttaagcaat
ggccttccatctggagttcatttcccacctcaggatcaaagaccacagggacaataccct
ccaatgatgatggcaaccaaaaatcatggaacgccaatgccttatgaacagtatccaaaa
tgtgactcccctgttgacgttggatattattccatgttgaatgcatattctaatctgagt
atctcaggcccccgaagtcctgaaaggcgtttctcactagacactgattatagagtaaac
tctgtagcttcagactgcagcagtgaagggagcatgagctgcgggagcagcgactcctat
gtggggtacaatgaccgctcctatgtcagctctcctgacccacagctggaagagagcctc
aagtgtcagcacatgcaccctcacagccgccttaattcccagcccttcctgcagagtttc
catgaccccttaaccagagttcagagttacagtcatgaagaaccaaagttccaccccaag
cgtcctcttccacacttggctatgcacctgcagcaccccgccgtgggtgcccgctccagc
tgtcctggcgattacccctctccaccaagttcagcacactcaaaggcaccacagctaggg
aggtccttagtggccacgaggatagacagcatttccgattctcgactctatgatagttct
ccttcaagacaaagaaagccttattctcggcaggaaggcccaggaagctgggataggcca
agctatgggatggatgcatatggctatcggcagacttactccttacccgataattccaca
cccccgtgctatgagtcgatcaccttccagagtctgcctgagcagcaggagcccacctgg
agaatcccctactgtggaatgccacatgatcctccaaggtaccaggacaaccgagagaag
atttatatcaatttgtgcaacatcttcccccctgaccttgtgaggcttgtcatgaaaagg
aatcctcacatgacagatgcccagcagctcgctgcagccatcttagtggagaaatcgcag
ctgggttattga
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