Mastomys coucha (southern multimammate mouse): 116072784
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Entry
116072784 CDS
T07224
Symbol
Vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04140
Autophagy - animal
mcoc04142
Lysosome biogenesis
mcoc04148
Efferocytosis
mcoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
116072784 (Vps11)
04140 Autophagy - animal
116072784 (Vps11)
04148 Efferocytosis
116072784 (Vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116072784 (Vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116072784 (Vps11)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116072784 (Vps11)
Hops complex
116072784 (Vps11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
Beta-prop_WDR3_1st
zf-C3H2C3
zf-RING_UBOX
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
zf-RING_5
DUF1993
zf-RING_11
zf-HC5HC2H
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-RING-like
Rv0250c
DLP_helical
VPS18_solenoid_1st
DUF5847
Motif
Other DBs
NCBI-GeneID:
116072784
NCBI-ProteinID:
XP_031200216
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFEKELVKEPLGNDGAAPGAAPVSGSTVSKFFCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQNSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYRPSLEGRGDREAPNYRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQAKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQEPSLW
EQALSYFARKEEDCKEYVAAVLRHIENKSLMPPLLVVQTLAHNSTATLSIIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLTPSLEAGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgattcgttttcttcgagaaagagctggtgaaggag
ccgctgggtaatgatggggccgctcccggggccgcgcctgtgtcgggatccactgtttcc
aagttcttttgcctccctcccggcatcactgtctgcgactcaggccgcgggagcctggtc
tttggagatatggaaggccagatctggttcttgccacgttctctacagcttacagggttc
caggcctacaaactacgggtgacacacttatatcagttgaagcagcacaatattctggca
tcagttggtgaggacgaagagggtatcaaccctttggtaaagatctggaacctggaaaag
agagacggtggcaatccactctgcacccggatttttcctgccatcccagggacagagcca
actgtcgtgtcttgtttgacggtccatgagaatctcaactttatggccattggtttcacg
gatggcagtgttactctgaacaagggagatattacccgggaccggcacagcaagacccag
attttgcacaaaggcaactatccagttactggactggcctttcgccaagcaggaaagacc
actcacctgtttgttgtgacaactgaaaatgttcagtcttacatagtttctggaaaggac
taccctcgtgtggagttggacacccatggttgtggcctgcgctgttcagccttgagcgac
ccttctcaggacctgcagttcattgttgctggagatgagtgtgtctacctttaccagcca
gatgaacgtgggccctgctttgcctttgagggccataagctcattgctcactggtttaga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagc
agagactcacagaactctgacaagcaaattctcaacatctatgacctgtgcaacaagttc
atagcctacagcgctgtttttgaggatgtagtggatgtgctcgctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcattgcaggagaaggacacacagaccaaa
ctggagatgctatttaagaagaatctatttgagatggcaattaacctggctaagagtcag
catctggacagtgatgggttggctcaaatcttcatgcagtatggagaccatctctacagc
aagggcaaccatgatggggctgttcagcagtatatccgaaccattggaaagttggagcca
tcctatgtgatccgtaagtttctggatgcccagcgcatccataacttgactgcctaccta
caaaccctgcatcggcaatctctggctaatgctgatcataccaccctgcttctgaactgc
tataccaagctcaaggacagctcgaagttggaggaatttatcaagacaaagagcgagagt
gaagtccactttgatgtggagacagccatcaaggtcctccggcaggctggctactactcc
catgccctctatctggctgagaatcatgcacaccatgagtggtacttgaagatccagctg
gaggacattaagaactatcaggaagcccttcggtatattggtaagctgccttttgagcag
gcagagagtaacatgaaacgctatggtaagatcctcatgcaccacataccagagcagaca
acccagttgctgaaaggcctctgtactgactatcgacccagtctggaaggccgaggcgat
cgggaggctccaaactaccgggccaactctgaggagttcatccccatctttgcaaacaac
ccaagagagctgaaagcctttctggagcacatgagtgaagtgcagccagactcgccgcag
ggcatctatgacacgctcttggagctgcggctgcagaactgggcccatgagaaggatcca
caggccaaggagaaacttcatgcagaggccatctccctgctaaagagtggccgattctgt
gatgtgtttgacaaagcattggtcctatgccagatgcatgacttccaggatggggtcctt
tacctctatgagcaggggaagctgttccagcagatcatgcattaccacatgcagcacgag
cagtaccggcaggtgattgccgtgtgtgagcgccatggggagcaggagccctccctgtgg
gagcaggccctcagttactttgcccgcaaggaggaagactgcaaggagtatgtggcagct
gtgcttaggcacattgagaacaagagccttatgccacctcttctagtggtccagaccctg
gcccacaactccacagctaccctgtccatcatccgcgattacctggtccaaaaactgcag
aaacagagccagcagattgcacaggatgagcttcgggtgcggcggtacagagaggagacc
actcgcatccgccaggaaatccaagagctcaaggcgagtccaaagattttccagaagacc
aagtgcagcatctgtaacagtgccttggagctgccttccgtccacttcctttgtggccac
tccttccaccaacactgctttgagagttactcagaaagtgatgctgactgccccacctgc
ctccctgagaaccggaaggtgatggatatgatccgggcccaggaacagaaacgagatctc
cacgatcagttccagcatcagctcaagtgctcaaatgacagcttctctgtgattgcggac
tactttggccgaggggttttcaacaagttgactctgctgactgaccctcctacggccaga
ctgacccccagcctggaggctggtctgcagcgggacctgctgatgcactccaggagggga
acttaa
DBGET
integrated database retrieval system
