Mastomys coucha (southern multimammate mouse): 116072913
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Entry
116072913 CDS
T07224
Symbol
Chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116072913 (Chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116072913 (Chrna5)
Ion channels [BR:
mcoc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
116072913 (Chrna5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116072913
NCBI-ProteinID:
XP_031200356
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MAARGSRRRALRLLLMVQLLAGRWRPAGAARGARGGLPELSSAAKHEDSLFRDLFEDYER
WVRPVEHLSDKIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPDDYGGIKI
IRVPSDSLWIPDIVLFDNADGRFEGASTKTVVRHNGTVTWTQPANYKSSCTIDVTFFPFD
LQNCSMKFGSWTYDGSQVDIILEDQDVDRTDFFDNGEWEIVSAMGSKGNRTDSCCWYPYI
TYAFVIKRLPLFYTLFLIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTVFLLVIE
EIIPSSSKVIPLIGEYLVFTMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKL
PKLLCMRSHADRYFTQREEAENGGGPKSRNTLEAALDCIRYITRHVVKENDVREVVEDWK
FIAQVLDRMFLWMFLLVSIIGTLGLFVPVIYKWANIIVPVHIGNTIK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggggtcgcggcggcgcgcgctgcgcctgctcttgatggtgcagctgctg
gcggggcgctggcggccggccggggcggcgcggggcgcgcggggagggttgcctgaacta
tcctctgctgcaaaacatgaagacagtttgtttagggatttatttgaagactatgaaagg
tgggttcgtcctgtggaacacctgagtgacaagataaaaatcaagtttggccttgcaata
tctcagttagtagacgtggatgagaaaaaccagctaatgacaacaaacgtctggttgaag
caggaatggatagatgtaaagttaagatggaatcccgatgactatggtggaataaaaatt
atacgtgttccttcagactctctgtggatcccagacatcgttttgtttgataatgcagat
ggacgttttgaaggggccagtacgaaaacagttgtcaggcacaatggcactgtcacgtgg
acgcagccagcaaactataaaagttcttgcactatagatgttacttttttcccatttgat
ctccaaaattgttccatgaaattcggctcgtggacgtatgatggatcccaggttgatata
atcctagaggaccaagatgttgacagaacagacttttttgacaatggagaatgggaaatt
gtgagcgcgatggggagcaaggggaaccggacggacagctgctgctggtacccctacatc
acatacgccttcgtgatcaagcggctgcctctcttctataccctatttcttattataccc
tgcatcgggctctcatttctcactgtggttgtcttctatctcccttcaaatgaaggtgaa
aagattagcctgtgcacttcggtgcttgtctctctgactgtcttccttctggtcattgag
gagattataccatcatcttccaaagtcatacctctgattggggagtacttggtattcacc
atgatctttgtgaccctatccatcatggtgactgtctttgccatcaacatccaccaccgc
tcttcttccacacacaatgctatggcgccttgggtccggaagatatttctccacaagctt
cccaaactactgtgcatgagaagccatgcagataggtatttcacccagagagaagaagct
gagaatggcggtggacctaaatctcggaatactttggaagctgcgctcgattgcattcgc
tacatcacgaggcacgtggtgaaagagaacgacgtccgagaggttgttgaagattggaaa
ttcatagcccaagttcttgatcggatgtttctatggatgtttcttctggtttcaatcatt
gggactctagggctgtttgttcctgttatttacaaatgggccaatataatagtcccagtt
cacattggaaacacaattaagtga
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