Mastomys coucha (southern multimammate mouse): 116072951
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Entry
116072951 CDS
T07224
Symbol
Arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04270
Vascular smooth muscle contraction
mcoc04360
Axon guidance
mcoc04611
Platelet activation
mcoc04625
C-type lectin receptor signaling pathway
mcoc04810
Regulation of actin cytoskeleton
mcoc05135
Yersinia infection
mcoc05152
Tuberculosis
mcoc05163
Human cytomegalovirus infection
mcoc05200
Pathways in cancer
mcoc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116072951 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
116072951 (Arhgef12)
04625 C-type lectin receptor signaling pathway
116072951 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
116072951 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
116072951 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116072951 (Arhgef12)
05205 Proteoglycans in cancer
116072951 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
116072951 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
116072951 (Arhgef12)
05152 Tuberculosis
116072951 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116072951 (Arhgef12)
Membrane trafficking [BR:
mcoc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116072951 (Arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Ribonuc_2-5A
Motif
Other DBs
NCBI-GeneID:
116072951
NCBI-ProteinID:
XP_031200411
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MFNGVKYVNVLFVCLFRERVSQWFPGWSYIPWVQLIQASLPMSWDYSGMCATPSLMKVTR
FPLKKPIRHGSILNRESPTDKKQKVERSSSHDFDPTDSSSKKTKSSSEESRSEIYGLVQR
CVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVV
KLIRSGSYVALTVQGRPPGSPQIPLADSEVEPSAIGHMSPIMTSPHSPGAAGNMERITSP
VLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTATQRLLKEIQEAKKHIPQLQE
QLSKATGSAQDGTVIAPSRPLGDALTLSEAETDPGDGLCRTDWSAGDASRPSSDSADSPK
SSLKERIYLEETPERSEGVQDAETQSLVGSPSTRGTPHIIGAEDDDFGTEHEQINGQCSC
FQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRRVFLEFHQFFLD
RSAHLKVAVPEEISMDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHLEDFRQKRSMGL
TLAESELTKLDAERDKDRGTLEKERACAEQIVTKIEEVLMTAQAVEEERSSTMQYVILMY
MKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSILGPPRRPSRHD
NSAIGRAMEIQKLRHPKHLATPSSVSPEPQDPAKLRQSGVANEGTDTGYVSTSSMSSATS
GAALPQEGGRENDTGTKQVGEALAPGDCLDSTPRVPNTVFDFPPPLLDQVQEEECEVERV
AEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLGLKPSEIKRQEV
INELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQLHVGLNEQMKA
VRKRNETSVIDHIGEDLLIWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFHTF
VQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPPEREKVKKAADHCRQIL
NYVNQAVREAENKQRLEDYQRRLDTSNLKLSEYPNVDELRNLDLTKRKMIHEGPLVWKVN
RDKSIDLYTLLLEDILVLLQKQDDKLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVA
TDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTKPIPLPQPPPCE
GDNDEEEPAKLKGEHHDLSVAGLQSPDRVLGLESPLISSKPQSHSLNTPGKSEAEHLFVT
ATQFSKEQHANGTLKEGDGGYPVTIPGPHLLLSEERWALDALRNLGLLKQLLVQQLGLTE
KNTQEDWQSFSRYGPASEEVQVDRGIRDLENVKACHAEEGQIYFKTGTGDIATCDSPRTS
TESCAAQDSVILASQDSQASNILVMDHMILTPEMPTAEPEGGLDDSGEHFFDAREAHSDD
NPSEGDGAVKKEEKDVNLRISGNCLILDGYDAVQESSTDEEPASSFSLQPVTGIPSVDSS
HQQQHSPQTAQSEEAVSPFSPEFLVQRRWRAMEDTCFEVQSPSPCTDAQSQILEYIHKIE
ADLEHLKKVEESYALLCQRLAGSALPDKLSDKS
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatggtgtaaaatatgttaacgtcctatttgtttgtttgtttagagaaagagtc
agccagtggttcccgggctggtcttatattccttgggttcaactcatccaagccagcctc
ccaatgagctgggattacagtggcatgtgtgccacacccagcttgatgaaagttaccagg
tttcccctcaaaaaacctataaggcatggaagtattttgaaccgagagtcaccaacagat
aagaaacagaaagtcgaacgcagttcatcacatgattttgaccccacagatagctcctcc
aagaagacaaagtctagttcagaggagagtagatccgagatctatggtcttgttcaacgc
tgtgtgatcatccagaaagatgacaatggattcgggctgacagtcagtggagacaatccc
gtcttcgtacaatctgtcaaagaagatggagcagccatgcgtgctggagtacagacaggt
gatcgaatcatcaaggtgaatggtactctggtgactcattcaaatcatctggaggtggtg
aaattaatcagatctggttcctatgtagctctcactgtccagggacgcccacctgggtcg
ccccagattccacttgctgattctgaagtagaaccatcagccattggacatatgtctccc
attatgacatcccctcattcccctggagcagcagggaatatggagagaatcactagtcct
gtgctcatgggggaggaaaacaatgtggtccataaccagaaagtagagattctgagaaaa
atgttacagaaggaacaggaacggctacagttactgcaggaagattacaaccgaacggct
acccaaagattgctcaaggagattcaggaagccaagaagcacatcccacagctgcaagag
cagctgtccaaagccacaggctctgctcaggacggaactgtaattgcaccctccaggcca
ttaggtgatgccctaacactcagcgaggcagaaacagatcctggagatggcttgtgcagg
actgactggagcgctggagatgcttctcggcccagtagtgacagtgcagatagtcccaag
agtagcctgaaagaaaggatttatctagaggaaaccccagagagaagtgaaggagttcag
gatgctgagacacagtcgctggtcggaagcccctctacccggggtacccctcacattatt
ggagcagaggatgacgactttggtactgaacatgagcagatcaatggacagtgcagctgt
ttccagagtattgaactgctgaagtctcgccctgctcacttggctgttttcttacaccat
gtagtctcacagtttgaccctgcaacattgctctgttatctctattcagacctgtataag
cagacgaactccaaggagactcggcgggtcttcctggagtttcatcagttcttcttggac
cgatctgcacacctgaaagttgctgttcccgaagagatctccatggatctagaaaagaga
agacctgagcttattcccgaagatctgcatcgccactacattcaaacaatgcaggagaga
gtccaccctgaagtccagaggcatttggaggattttcgacagaaacgcagcatggggctg
accttggctgagagtgagctgactaaacttgatgcagagagagacaaggaccggggaact
ctggagaaggagcgagcatgtgcggaacagattgttaccaaaattgaagaagtattgatg
actgctcaggctgtagaagaagaaaggagttccacaatgcagtacgtaattctcatgtat
atgaagcatttgggagtaaaagtgaaagaacctcgaaacttggagcacaagcggggtcgg
attggctttcttccaaagatcaagcaaagcatgaagaaagatagagagggtgaagaaaaa
gggaagcgaagaggattccccagcattttgggacccccaagaagaccaagccgccatgac
aacagtgcaattggcagggccatggagatacagaagctgcgccacccgaagcacttagcc
actccctcatctgtgagtcctgagcctcaagaccctgccaagttgcgccagagtggagta
gccaatgaaggaacagacactggatacgtgtccaccagttccatgtcctctgccacctca
ggggctgctcttcctcaagagggagggagggagaacgatacaggaacaaaacaagttgga
gaagcattggcacctggagactgcttggacagcacacctcgcgtccctaatactgttttt
gacttcccccctcctctattagatcaagtgcaggaggaggaatgtgaagtggagagggtg
gcagaacatggaacccccaaaccctttcggaagtttgacagcatcgcctttggagaaagt
cagagtgaggatgaacagtttgaaaatgacctggaaacagatccacccaactggcagcag
cttgttagcagagaagtgttactgggactgaaaccttctgagatcaaaagacaggaagta
attaatgaactgttctacactgagagagctcatgtccgaacactgaaggttcttgaccaa
gtattctatcagcgagtgtccagagaagggattctatcaccttcagaactacgcaagatt
ttttcaaacttggaagatatccttcaacttcatgttgggttgaatgagcaaatgaaagct
gtccgaaaaaggaatgagacttctgttattgatcatattggggaagatctgctcatctgg
ttcagtggaccaggggaggagaagctgaaacacgctgccgccacgttctgcagtaaccag
ccttttgccctggaaatgatcaagtctcgccagaaaaaggattctcgattccacactttt
gtccaagatgctgagagtaaccctctgtgtcgtcgtcttcagctgaaggatatcattccc
acccaaatgcagaggctcactaaatacccacttcttttggataatattgccaaatacaca
gaatggcctccagaaagggaaaaggtgaagaaggctgcagatcattgtcgtcagatctta
aattatgtaaatcaggctgtcagggaggcagaaaacaagcagcgcttagaagactatcag
cgtcgccttgacacctccaatctcaagttgtccgagtacccaaatgttgatgagctcagg
aatttggatttaacaaaaagaaagatgattcacgaagggccattggtctggaaggtgaat
agagataaaagcattgatctttatacgctgctgctggaagacattcttgtgctgttacaa
aagcaggatgacaagctggtgctaaggtgccacagcaagattctggcatccacagccgac
agcaaacacaccttcagccctgtcattaagctgagcacagtgctagttcgacaggtggca
acagacaacaaagctttattcgtcatctccatgtcagataatggagcgcagatttatgaa
ctggtagcacagacagtttctgaaaagacggtctggcaagacctcatctgtcgaatggct
gcgtcagtgaaggagcagtccacgaaaccgattcccctcccacagccgccaccttgcgaa
ggagacaatgatgaggaagaaccagccaagttaaaaggggagcaccatgatctttcagtt
gctggtctgcaaagtccagacagagttttgggattagaatctcccttaatttcatcaaaa
cctcagtctcattcactgaatacccctggcaaatcagaggcagaacatctctttgtgacc
gcaacgcagttttcaaaggagcagcatgcaaatggaacactgaaggaaggtgatggcggg
tatccagtcacaatcccaggtccacacttgcttttgtcagaggagcggtgggcactggac
gcattgagaaatttgggtttgttgaagcagttgctggtacagcagttaggtctcaccgag
aagaacactcaggaagactggcagtccttctcaagatatggaccagcttctgaagaggta
caggtagacagaggcatccgggacttggaaaatgttaaggcttgtcatgccgaggaagga
cagatatattttaaaactggaactggtgacattgcaacttgtgacagtccacggacttca
actgagtcttgtgctgcacaggattcagtgatactggcatcccaagacagccaggcaagt
aacattttagtaatggaccacatgatcctgaccccagagatgcctactgcagagccagaa
gggggtctggatgacagtggagagcacttttttgatgcccgtgaagcacatagtgatgat
aatccatcagaaggtgatggagcagttaaaaaggaagagaaggatgttaatttacgcatc
tcaggaaactgtttgatccttgatggctatgatgccgtgcaggagagctccacagatgag
gagcctgcctcctcattcagcctgcagcctgtgacaggcatcccttctgtggactccagc
caccagcagcagcattcccctcagacggctcagtctgaggaggcagtttcaccattcagc
ccagaattcctggtgcagcgacgctggagagctatggaggacacttgttttgaggtccag
agtccctctccttgtacagatgcacaaagccaaatcctggagtacattcataaaatagag
gctgacctggaacacttaaagaaggtggaggaaagttacgctcttctttgccaaaggctg
gctggctcagccctccctgacaagctctcagataaaagttag
DBGET
integrated database retrieval system
