Mastomys coucha (southern multimammate mouse): 116073367
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Entry
116073367 CDS
T07224
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116073367 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116073367 (Myo5c)
04131 Membrane trafficking [BR:
mcoc04131
]
116073367 (Myo5c)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116073367 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116073367 (Myo5c)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116073367 (Myo5c)
mRNA cycle factors
P-body specific factors
116073367 (Myo5c)
Membrane trafficking [BR:
mcoc04131
]
Others
Actin-binding proteins
Myosins
116073367 (Myo5c)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116073367 (Myo5c)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116073367 (Myo5c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
IPGAL2_N
Myosin_N
nSTAND3
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
116073367
NCBI-ProteinID:
XP_031201108
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MAVAELYAQYNRVWIPDPEEVWKSAEIAKDYRAGDRVLRLLLEDGTQLDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRIY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTSMGGNTVIEGVNDR
ADMVETQKTFTLLGFKKDFQMDVFKILAAILHLGNVQVTTVGNERSSVSEDDSHLKVFCE
LLGLETSKVAQWLCNRKIVTSSETVVKPMTRPQAINARDALAKKIYAHLFDFIVEQINQA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNSSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEILRASKFPLCAAFFQESPVPSSPF
GAMITVKSAKQVIKPNTKHFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKMPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGILMTQQELSLSDKKEVCKVV
LHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQDCIMIQKHVRGWLQRRKFLRER
RAALTIQQYFRGQQTVRKAITATALKEAWAAIILQKHCRGYLVRNLYQLIRVATITIQAH
TRGFLARRQYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNRENHGLVEKLTSLAALRVGDLEKVQKLEAELEKAATHRHSYEEKGRRYRDTVEERLSK
LQKHNAELELQRERAEQKLQEKSEELKEKMDKLTRQLFDDLQKEEQQRLLLEKSFELKTQ
AYEKQIESLREEIKALKDERSQLHYQLEEGRVTSDSLKGEVARLSKQAKTISEFEKEIEL
LQAQKLDVEKHVQSQKREMRERMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETDINESIRHE
VTRLTSENMMIPDFKQQISELERQKQDLESRLKEQAEKMEGKLEEPFSHLNRVREEERMQ
GKATEAQSEMHREGKERLVGTIQEPQETIRFPKKQPEAEDEVESILQQEASRLSLENRDL
EEELDMKDRMIRKLQDQVKTLTKTIEKANNVHLPSGSREYLGMLEYKKEDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSAINGIKHVVKEHFEDLEM
LSFWLSNTCHFLNCLKQYSGEEEFMKYNSPQQNKNCLNNFDLTEYRQILSDVAIRIYHQF
IIVMENNLQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYS
TMCQNGLDPEIVRQAVKQLFYLVGAVTLNSLLLRKDMCSCRKGMQIRCNISFLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEISQCCTSLSAVQIIKILNSYTPIDDFE
KRVNPSFVRKVQALLNNRGDSSQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFKLGFLR
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctctacgcgcagtacaacagggtttggatcccagatcctgaagaa
gtttggaagtcggctgaaattgccaaggactacagagcgggtgaccgggtcctccgactc
ctgctggaggatggcacgcagctggattaccccgttgacccagggtcactgcctccactt
cggaacccagacatcctggtgggtgagaatgacctcacagctctcagctacctccatgag
cctgcagtgctgcataacctcagaatccgcttcgcagagtccaaactcatctacacctac
agtggaatcattttggtggccatgaatccttacaaacagctaccaatatatggggatgcc
atcatccacgcctacagcggacagaacatgggtgacatggacccacacatctttgcggtt
gcagaggaggcctacaagcagatggccaggaacaatagaaatcagtccataatcgtgagt
ggagaatcaggagccgggaaaactgtctctgcacgctatgccatgaggtacttcgccacc
gtcagcaagtccagcagcaacgcccatgtggaggacaaagtcctagcatccaatcccata
actgaggctgttggaaatgccaagaccacccgcaatgacaacagcagtcggtttgggaaa
tacacagaaatcagctttgatgagagaaaccagatcattggtgccaatatgagaatctac
ctcctggagaagtccagagttgtctttcagtcagaaaatgaacggaattaccacatcttc
taccagctttgtgcatctgcacaacagtcagaatttaaacaccttaaactggggagcgcg
gaagagttcaactacacgagcatgggagggaacactgtcatcgaaggtgtcaatgacaga
gctgacatggtggaaacccagaagaccttcacactactgggattcaagaaagattttcag
atggatgtttttaagatcctagctgccatcctgcatctgggcaatgtgcaggtcaccacg
gtgggcaacgagaggtcttcagtcagtgaggatgacagtcacctgaaggtgttctgtgag
ctcttgggcctggagaccagcaaagtggctcagtggctatgcaacagaaaaattgtgacc
tcatcggaaacggtggtaaagcccatgaccaggcctcaggccatcaatgccagggatgcg
ctggccaaaaagatctacgctcacctgttcgacttcattgtagagcaaatcaaccaggcg
ttgcacttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
acctttgatgtaaacagctttgaacagttctgcatcaattatgctaatgaaaagctacag
cagcagtttaacctgcacgtctttaaactcgagcaagaggagtacatgaaggaggacatc
ccctggactctgatagacttctatgacaaccaacctgttattgacctgatcgaagcaaaa
atgggcattttggagttgctggatgaagaatgcttgttgcctcatggaaccgacgaaaac
tggcttcaaaagctgtataacaattttgtcaacaagaactctttattcgagaagcctcga
atgtcaaactcatccttcatcatccaacattttgctgacaaggtggagtaccagtgtgaa
gggttcctggagaagaacagagacactgtctatgacatgctggttgaaatcctcagagca
agcaagtttcctctctgtgccgccttttttcaagaaagccctgttccgtcttctcctttt
ggggcaatgatcacagttaaatctgcaaagcaggtcattaagccaaacaccaaacacttc
cggaccacagttgggaacaagttccgcagctctctgtacttgctcatggaaaccctcaat
gctaccacaccccactacgtccggtgcatcaagcctaatgatgagaaaatgccctttgag
tttgactccaagcggattgtccagcagctgcgagcctgtggcgttttagaaacaattcga
atcagtgcccagagctatccttccaggtggacatacctcgagttctacagccgctatggc
atcctcatgacccagcaggagctgtccctgagtgataagaaggaagtgtgcaaggtggtt
ttgcacaggctcatccaggattctaaccagtatcagtttggtagaaccaaaattttcttc
agagcagggcaagtggcttatttagagaaactccgcttggataaactgagacaggattgt
atcatgattcaaaagcacgtgcggggctggctgcagcggcggaagttcctccgcgagaga
cgagctgccctgactatccagcagtacttccggggtcagcagacagtgaggaaggccatc
actgccactgctttgaaggaggcctgggcagccatcatcctccagaagcattgccgaggc
tacctagtccgtaacctgtaccagctgattcgtgtggcaaccatcaccatccaggcacac
accaggggcttcctagccaggaggcagtaccggaagttgctgcaggagcacaaggcagtg
atccttcagaagtatgcgagggcgtggctggcccggcgcagattccagaacatccgcagg
ttcgtgctcaacattcagctaacttacagggtccagcgcttgcagaagaagctggaggat
cagaatagagagaaccatgggctggtggagaagctgaccagcctggccgctctgcgggtt
ggtgatctggagaaggttcaaaagctggaagcagagctggaaaaagcagctacccaccgg
cacagctatgaagagaagggccggagatacagggacacggtggaggagagattgtcaaag
ctgcagaagcacaatgcggagctggagttacagagagagcgagcagagcagaaactgcaa
gagaagtctgaggagctgaaagaaaaaatggacaagctcaccaggcagctgtttgatgac
ctgcagaaagaagaacagcagagactacttcttgaaaaaagttttgagctaaaaacacaa
gcctatgagaaacagatagagtctctgagagaagaaattaaagccctcaaggatgagagg
tcgcagctgcattaccagctggaggagggacgggtcacctctgacagtctgaagggagag
gtggcccgcctaagcaagcaggcaaagaccatctctgagtttgagaaggagatagagctg
ctgcaggcccagaagctagatgtggaaaagcacgtgcagtcacagaaacgggagatgaga
gaacggatgtcggaggttaccaagcagcttttggaaagctatgacattgaagatgttaga
agcaggctctccgtggaagatctggaacatttaaatgaagatggagaactttggtttgcc
tatgaagggctaaagaaagcaactcgtgttctggagagccatttccagtctcagaaggat
tgctacgaaaaggagatcgaaggtctgaacttcaaagtcgtgcacctgagccaagaaatc
aaccacctgcagaagctgttcagagaagagacagacatcaatgaaagtatccggcatgaa
gtcaccaggctgacatcagaaaacatgatgatcccagactttaagcagcagatttcagag
ctggagaggcagaagcaggatcttgaatcccgcctgaaggagcaggctgagaagatggaa
ggaaagctggaagagccgttcagccacctgaaccgagtacgagaagaggagagaatgcag
ggcaaggccacggaagcacagagtgagatgcatcgcgaagggaaggagaggctggtgggt
acgatccaagaaccgcaggagaccatcaggttcccaaagaagcaaccagaagctgaggac
gaagtggagagcattctccaacaagaggcatcccgactctctttggaaaacagggacctt
gaagaagagctagacatgaaggacagaatgattagaaagctacaggatcaagtcaagact
ctgaccaagacgattgaaaaagccaacaatgtgcacctgccctcaggatccagggagtac
cttggaatgctggagtacaagaaagaagatgaggcgaagctcattcaaaacctcattctt
gacctgaagcctcgaggtgtggtggtgaacatgatccccgggctgccagctcacatcctg
ttcatgtgcgtacgctatgcagactccctgaacgatgccaacatgctcaaatctctcatg
aacagcgctattaatggcatcaagcatgtggttaaggaacattttgaagatttggagatg
ctgtccttctggctttccaacacttgtcattttctcaactgcctgaagcagtacagtgga
gaagaggaattcatgaagtataacagcccacagcagaataagaactgcttgaacaatttt
gatcttacagaatacagacagattctcagtgatgtggccatacggatttatcatcagttc
atcattgtgatggaaaacaacctccagccgataatagtgccaggcatgctggaatatgag
agtctgcagggcatttccggcctgaagccgactggtttccggaagcgctcatccagcatc
gatgacacagatgcctacaccatgacgtccatcctgcagcagctgagctacttctacagc
accatgtgtcagaacggcctggacccggagattgtgaggcaggcagtcaagcagctgttc
taccttgtcggggcggtgaccctcaacagcctcctcctgcgcaaggacatgtgctcctgc
aggaaaggcatgcaaatcaggtgcaacatcagcttcttggaagaatggctaaaagataag
aatttgcagaacagcttagccaaggagacactggagcccctctcccaggcagcctggttg
cttcaggttaagaagaccacagacagcgatgcgaaggagatctcccagtgttgcacttcc
ctgtctgctgtgcagatcatcaagatccttaattcatacacacctatagacgacttcgag
aaaagagtcaatccctccttcgttcgcaaagtacaggctcttctgaataaccggggcgac
tcatcacagctgatgctggacaccaagtatctttttcaagtcacatttcctttcaccgcc
tcaccacacgccctggagatgacccagatccccagcagcttcaagcttggctttctcagg
agactgtag
DBGET
integrated database retrieval system
