Mastomys coucha (southern multimammate mouse): 116073453
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Entry
116073453 CDS
T07224
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116073453 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116073453 (Myo5a)
04131 Membrane trafficking [BR:
mcoc04131
]
116073453 (Myo5a)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116073453 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116073453 (Myo5a)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116073453 (Myo5a)
mRNA cycle factors
P-body specific factors
116073453 (Myo5a)
Membrane trafficking [BR:
mcoc04131
]
Others
Actin-binding proteins
Myosins
116073453 (Myo5a)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116073453 (Myo5a)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116073453 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_22
Myosin_N
AAA_16
DUF5382
NPHP3_N
nSTAND3
MC7
Motif
Other DBs
NCBI-GeneID:
116073453
NCBI-ProteinID:
XP_031201227
LinkDB
All DBs
Position
Unknown
AA seq
1880 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGRDLEYRLDPKTNELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADSFHYTKQGGSPMIEGVD
DAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFASRDSDSCTIPPKHEPLIIF
CDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PTSATASGRTPLTRVPVKPTKGRPGQTAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRRYKIRRAA
TVVLQSYLRGYLARNRYRKILREHKAVIIQKRVRGWLARTHYKRTMKAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGVYNSE
TEKLRNDVERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKSIEERADKYKQET
EQLVSNLKEENTLLKQEKETLNHLIVEQAKEMTETMERKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMALMLNVPKPGHKRTDSTHSSNESEYTFSSEFAETEDTVPRT
EEPTEKKVPLDMSLFLKLQKRVTELEQEKQLMQDELDRKEEQVFRSKAKEEERPQIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKDDKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNR
SSTMDYQELNEDGELWLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNR
QQQLLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRMIDL
MEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQG
MLEYKREDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTS
TINSIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDL
AEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIAD
EGTYTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLLLRKDMCSWSK
GMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALT
TAQIVKVLNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSS
LALETIQIPASLGLGFIARV
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtccgagctctacactaagtttgctagggtttggatacctgatcctgaggaa
gtatggaaatcagcagagttgctcaaggattacaagcctggagataaagtgctcctgctt
caccttgaggaagggagggatttggaataccgtctagatccaaagaccaatgagctccct
cacttacggaaccctgacatacttgttggagaaaatgacctcacagccctcagctatctt
catgagcccgctgtgctacataatctccgagttcgcttcatcgattccaaactgatttat
acgtattgtggaatagtcctagtagctataaatccctatgaacagctgcctatttatgga
gaagatattattaatgcttacagtggccagaacatgggtgacatggatcctcacatcttt
gcagtagctgaagaggcttataagcaaatggcaagggatgaacgaaatcagtccatcatt
gtaagtggagagtcaggcgcagggaagacggtctcggccaagtatgccatgcggtacttt
gcaactgttagtggttctgccagtgaggccaatgttgaggaaaaggtcttggcctccaac
cccatcatggagtcaattggaaatgccaaaacaacgaggaatgataatagcagccggttt
ggaaaatatattgaaattggttttgacaagagatatagaatcatcggtgccaatatgaga
acttaccttttagagaaatccagagtggtgttccaggcagaagaggagagaaactaccat
atcttctatcagctctgtgcttcagcaaagttacctgagtttaaaatgcttcggttagga
aatgcagatagttttcattacacgaagcaaggaggcagccccatgatagaaggagtagat
gatgcgaaggagatggcacacaccaggcaggcctgcactctgctgggaattagtgaatct
taccaaatgggaatttttcgaatacttgctggcattcttcatttaggcaatgttggattt
gcatctcgagattcagatagctgtacaatacctcccaagcacgagcctcttatcatcttc
tgtgaccttatgggtgtggattatgaagagatgtgtcactggctctgccaccgaaagctg
gctactgccacagagacatacatcaagcccatctccaagctgcaggccacaaatgcccga
gatgctttagcaaagcacatctatgcaaagctctttaactggattgttgatcacgtcaat
caggctctccattctgctgtcaagcagcactctttcattggcgtgctggacatctacgga
tttgaaacatttgagataaatagttttgaacagttctgtataaattatgcaaatgaaaaa
ctacagcaacaattcaacatgcatgtcttcaaattggaacaggaggaatatatgaaggaa
caaattccgtggacactcatagatttctatgataatcagccttgtatcaatcttatagaa
tctaaactaggcattcttgatttgctggatgaagaatgtaagatgcctaaaggcacagat
gacacgtgggcccaaaagctgtacaacacacacttgaacaaatgtgccctcttcgagaag
ccccgcatgtcaaacaaagctttcatcatcaaacattttgctgacaaagtggagtaccag
tgtgaaggttttcttgaaaagaataaagacaccgtttttgaagaacaaattaaagtcctt
aagtcaagcaagtttaagatgctaccagagctatttcaagatgatgagaaggccatcagt
cccacctctgccactgcctcagggcgcactcctctcactcgagttcctgtaaagcccacc
aagggccgccccggccagactgccaaggagcacaagaagacagtgggacatcagtttcga
aactcccttcacctgcttatggaaacccttaacgccactactcctcactatgtacgctgt
attaagcctaatgatttcaagtttccattcacatttgatgagaagagggcagtgcagcag
ctaagagcatgtggtgtcctggagaccatccgcatcagcgcagcagggtttccctcacgg
tggacttaccaagagtttttcagccggtaccgggtcctaatgaagcaaaaagatgtgctg
ggagatagaaagcaaacgtgcaagaatgtattagagaaactgatattggacaaggataaa
taccagtttggtaagacaaagatcttttttcgtgctggtcaagtggcctatctagaaaaa
ttgagggctgacaaactgagggctgcctgcatccggattcagaagaccattcgtgggtgg
ctgctaaggaagagatacttgtgcatgcagagggcagccatcacagtgcagcgatacgtg
cggggctatcaggctcgatgctatgctaagtttctgcgcagaaccaaggcagcaaccacc
attcaaaagtactggcgcatgtatgtggtccgcaggaggtacaagattagacgagctgcc
acggttgttcttcagtcttacttgagaggctacttggcaagaaataggtatcgcaagata
ctccgtgaacacaaagcagtcatcattcagaaacgtgtccgtggctggctggctcgaaca
cattataagaggaccatgaaagccatcatctaccttcagtgctgcttccggcggatgatg
gccaagcgtgagctgaagaaactcaaaattgaggctcgctctgtggaacgctacaagaag
ctccatattggcatggaaaacaagattatgcagctgcagcgcaaagtggatgagcagaat
aaagactacaaatgcctcatggagaaactgaccaatctggaaggagtatacaactctgag
actgaaaaactgcgaaatgatgtagaacgtcttcagctaagcgaagaggaagctaaggtt
gccactgggcgggtccttagtctgcaggaagaaattgcaaaactccgaaaagacctggaa
caaactcgatcagagaaaaagtccattgaagaacgagcagataaatacaaacaagaaact
gagcaactggtgtccaacttgaaggaagaaaacactttgctgaagcaggaaaaggagact
ctgaatcacctcattgtggagcaggctaaggagatgacagaaactatggagaggaagtta
gtggaagagacaaaacaactggagcttgacctgaatgatgagaggctgaggtaccagaac
cttctaaatgagttcagtcgcctggaggagcgctatgatgacctcaaggaagagatggcc
ctgatgctgaatgtgcctaagccaggacacaagagaacagactctacccacagcagtaat
gagtctgaatacaccttcagctctgaatttgcagaaacggaagacactgtaccaagaaca
gaggagccaactgagaagaaagtgcctctggatatgtcattgttccttaagctccagaag
cgtgtcacagagctggaacaggagaagcagctgatgcaggatgaactggaccgaaaggag
gagcaggtgttccgcagcaaggcaaaggaagaagaaagaccacagattagaggtgctgaa
ctcgaatatgagtccctcaagcgtcaagaactggagtcagaaaacaaaaaactgaaaaat
gagctgaatgagttacgcaaagccctcagtgagaaaagtgctccagaagtgactgcgcca
ggtgcacctgcttaccgagtcctcatggaacagctgacctcagtgagtgaggagctcgat
gtccgcaaggaggaagtcctcatcttgaggtcgcagctggtgagccagaaagaagccatc
caacccaaggatgacaagaatacaatgacagattccacaattcttttggaagatgtacag
aaaatgaaagacaaaggtgaaatagcacaagcgtatattggtttgaaagaaacgaacaga
tcatctactatggattaccaggagttgaatgaggatggagagctctggctggtttatgaa
gggttaaaacaagccaacaggctcttagaatcccagctacagtcacagaagaggagccat
gagaatgaggctgaggccctccgtggggagatccagagcctaaaggaagaaaacaaccgg
cagcagcagctgctagcccagaacctgcagctgccccctgaggcccgcattgaggccagc
ctgcagcatgagatcacccggctgaccaatgaaaacctgtattttgaggaattatatgca
gatgaccctaagaagtatcaatcctatcggatttcactttacaaaaggatgattgatctg
atggaacaacttgaaaagcaggataaaactgttcggaaactgaagaaacagctgaaagtc
tttgccaaaaaaatcggtgaactagaagtgggtcagatggagaacatatctccaggacag
atcatcgatgagcctatccggccagtcaacattccccggaaagaaaaggatttccaagga
atgctggagtataaaagggaagatgagcagaagcttgttaagaacctgattctagaacta
aagccacgtggtgtggctgtcaatctgattccagggttaccagcatatatcttgtttatg
tgtgtgcgacatgctgactacctgaacgatgatcagaaagtaagatcattgctgacatca
acaattaacagcatcaaaaaagtcctgaagaaacgaggtgacgattttgaaactgtctcc
ttctggctctctaacacatgtcgatttttgcactgtttgaagcaatatagtggagaagag
ggcttcatgaaacacaacacgtctcgccagaatgaacactgcctcaccaattttgacctt
gctgaatatcggcaagtactgagtgacttggccattcagatctatcagcagcttgtgagg
gtgttagagaacattcttcagccaatgatagtctcaggcatgctagagcatgaaacaatt
cagggcgtatctggggtgaagcccacggggctcagaaagcgaacctccagtatcgcagat
gagggcacctacacactggactccatcctgcggcagctcaactccttccattcagtcatg
tgtcagcatggcatggacccagagctaatcaagcaggtggtcaagcagatgttctacatt
gtgggcgccatcaccctcaacaacctcctcctgcgcaaggacatgtgctcctggagcaag
ggcatgcagatcaggtacaatgtcagtcaactggaagaatggctacgtgacaagaatcta
atgaacagtggggccaaggagactctggaacctcttatccaggctgctcagcttttgcaa
gtgaaaaagaaaactgatgatgatgcggaagctatctgctccatgtgcaacgccctgacc
acagcccagatcgtcaaagtgttgaatctgtacacacccgtgaatgagtttgaagagcgg
gtctctgtttcatttatccgcactatacagatgcggttacgagacagaaaagactctccg
cagctgctcatggatgcaaaacacatctttcctgtcacgtttccctttaacccatcctcc
ctggccctagaaaccatccagatcccagccagcctgggcctgggcttcattgcacgggtc
tga
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integrated database retrieval system
