Mastomys coucha (southern multimammate mouse): 116073720
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Entry
116073720 CDS
T07224
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116073720
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116073720
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
116073720
NCBI-ProteinID:
XP_031201603
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MEFPFGSVGTTNFRRFTPESLAEIEKQIAAHRAAKKARPKHRGQKDKAEKPRPQLDLKAC
NQLPRFYGELPEELVGEPLEDLDPFYSTHRTFIVLDKSRTISRFSATWALWLFSPFNLIR
RTAVKVSVHSWFSIFITVTILVNCVCMTRTDLPEKVECLEGLISLDSNALAGAILNKPGT
TDPLLCGNGSDAGHCPGGYICKKTPDNPDFNYTSFDSFAWAFLSLFRLMTQDSWERLYQQ
TLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKKYREALEV
LQKEQEVLAALGIDTTSLHSHNGSPLAPKNANERRPRVKSRVSEGSTDDNRSPQSDPYNQ
RRMALDAARQKNFLSADYLDEPFRAQRAMSVVSIMTSVIEGADKHVPVSFTVPKALQLLR
VFKLAKSWPTLNILIKIIGNSVGALGNLTFILAIIVFIFALVGKQLLSENYGCSKDGFSV
WKGERLRWHMCDFFHSFLVVFRILCGEWIENMWVCMEVSQKSICLILFLTVMVLGNLVVL
NLFIALLLNSFSADNLTAPEDDGEVNNLQVALARIQVFGHRASRAVISYISSHCRLRWPK
VEPQLGVKPPLTSSKAENHIATEAVNAAVGNLAKPALDGPKENPGDFITDPNVWVSVPIA
EGESDLDELEEDMEQASQSSWQEESPEGEQEQLPQVQTCDEHQAARSPASGMSSEDLAPY
MGERWKRGDSPRIPAEGVDDTSSSEGSTVDCPDPEEILRKIPELADELDEPDDCFTEGCT
RRCPSCQVNSSKFPWTTGWQLRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKP
RLKSVLEYTDRVFTFIFVFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILES
DVASIKALRTLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVN
LFAGKFSRCVDTRSNPFSIVNLTMVTNKSECHIQNNTGHYFWVNVKVNFDNVAMGYLALL
QVATFKGWMDIMYAAVDSRDINSQPSWEESLYMYLYFVVFIIFGGFFTLNLFVGVIIDNF
NQQKKKIRGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDII
IMVLICLNMITMMVETDDQSEEKTKVLGKINQFFVAVFTGECVMKMFALRQYYFTNGWNV
FDFIVVILSIGSQVFSAILKSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALM
MSLPALFNIGLLLFLVMFIYSIFGMASFANVVEEAGIDDMFNFKTFGNSMLCLFQITTSA
GWDGLLSPILNTGPPYCDPNLTNSNGSKGNCGSPAVGIIFFTTYIIISFLIVVNMYIAVI
LENFNVATEESTEPLSEDDFDMFYETWEKFDPEATQFIAFSALSDFADTLSGPLRIPKPN
QNILIQMDLPLVPGDKIHCLDILFAFTKNVLGESGELDSLKTNMEEKFMATNLSKASYEP
IATTLRWKQEDISATVIQKAYRSYMLQRSLTLSNPLSVSRAEQDGESPPGEGYVTFMANG
NSRLPDKSETASATSFPPSYDSVTRGLSDRVNVSTSSSMQNEDEVTAKEGSSPGPQ
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccctttgggtccgtgggaactaccaacttcagacggttcactccagagtcg
ctggcagagatcgagaagcagatcgctgcccaccgcgccgccaagaaggccagacctaag
cacagaggacagaaggacaaggctgagaagcccaggcctcagctggacttgaaggcctgt
aaccagctgcccaggttctatggtgagctcccagaagaactggtcggggagcctctggag
gacctggatcctttctacagcacacaccggacattcatagtcttggataaaagcaggacc
atttccagattcagtgccacttgggccctgtggctcttcagtccctttaacctgatcaga
agaacggccgtcaaagtgtctgtccactcctggttctccatatttatcactgtcactatt
ttggtcaactgtgtgtgcatgacccgaactgatcttccagagaaagtcgaatgcctagag
ggtctaatttcattagactccaatgccctggcaggagccatcctcaacaagcctggtact
acggatcccttgttgtgtggcaatgggtctgatgctggtcactgccctggtggttatatc
tgcaagaaaacccctgacaacccggatttcaactacaccagctttgattccttcgcttgg
gcattcctgtcactgttccgtctcatgacgcaggactcctgggagcgcctataccagcag
acactccgggcttccgggaaaatgtacatggtcttttttgtgctggtcatcttccttgga
tcattctacctggtcaatttgatcttggctgtggtcaccatggcatatgaggagcagaac
caggcaacaattgcagaaatcgaagccaaggaaaaaaagtaccgcgaagccctcgaggtg
ctgcagaaggaacaggaggtgctggcagccctggggattgacacgacctcactccattcc
cacaatggatcacccttagcccccaaaaacgccaatgagagaagacccagggtgaaatca
agggtgtcagagggctcgacggatgacaacagatcaccccaatctgacccttacaaccag
cgcaggatggcactcgatgccgcaaggcagaagaacttcctgtctgcagattacttggat
gaacctttccgagcacagagggcgatgagcgtcgtcagtattatgacttctgtcattgag
ggtgccgataagcatgtccctgtgtccttcactgtccccaaggctctgcagctgcttcgg
gtcttcaagctagccaagtcctggcccaccctgaacatactcatcaagatcattggcaat
tctgtgggggccctgggcaacctgaccttcatcctggccatcatcgtctttatctttgcc
ctggtcggaaagcagcttctctcggagaactacggttgcagcaaagatggcttctctgtg
tggaagggcgagagactccgctggcacatgtgtgacttcttccattccttcctcgtggtc
ttccggatcctctgcggggagtggatcgagaacatgtgggtctgcatggaggtcagccag
aaatccatctgcctcatcctcttcttgactgtgatggtgctgggcaacctggtggtgctc
aaccttttcatcgctttattgctgaactccttcagcgcggacaatctcacagccccagag
gatgacggggaggtgaacaacttgcaggtagcactggccaggattcaggtttttggccat
cgggccagtcgggccgtcattagttatatcagcagccactgccggctccgctggcccaag
gtggagccccagctgggggtgaaacccccactcaccagctccaaagccgagaaccacatt
gctactgaagctgtcaacgctgcagtggggaacctggcaaagccagctctcgacggcccc
aaggagaaccccggggacttcatcaccgatcctaatgtgtgggtctctgtgcccattgct
gagggagaatctgacctcgatgagcttgaggaagatatggagcaggcttctcagagctcc
tggcaggaagagagccccgaaggagagcaggagcagctaccacaagtccaaacgtgtgac
gaacaccaggcagcccgaagcccagcctccgggatgtcctccgaggacctggctccatac
atgggggagagatggaagaggggggatagccctcggatccctgcagagggagtggatgat
acgagctcctctgagggcagcactgtggactgcccggacccagaggagatcctgaggaag
atccctgagctggcagatgagctggacgagcccgatgactgcttcacagaaggctgcact
cgccgctgtccctcctgccaagtgaacagcagtaagtttccttggaccacaggctggcag
ctgcgcaaaacctgctaccgcattgtggaacacagctggttcgagagtttcatcatcttc
atgatcctgctcagcagcggagcactggcctttgaggataactacctggaagaaaaaccc
cgactgaagtctgtgctggagtacactgatagagtgttcaccttcatcttcgtattcgag
atgttgctcaagtgggtagcttatggcttcaaaaaatatttcaccaatgcctggtgctgg
ctggacttcctcatcgtgaatatctctctgacaagcctcatagcaaagatccttgagtca
gatgtggcatccatcaaagcccttcggactctccgcgccctccggccgctgagggctctg
tctcgatttgaaggcatgagggtagtggtggatgccttggtgggcgccatcccttccatc
atgaacgtcctcctcgtctgcctcatcttctggctcatcttcagcattatgggggtgaac
ctctttgccgggaaattttcgagatgtgttgacaccaggagcaacccattttccattgtg
aatttgacaatggtgactaacaagtctgagtgtcacattcaaaacaacactggccactac
ttctgggttaacgtcaaagtcaacttcgacaacgttgctatgggctacctggcgcttctc
caggtggcaaccttcaaaggctggatggatattatgtatgcagctgtggattcccgagat
atcaacagtcagcctagctgggaggaaagcctgtatatgtacctgtacttcgtcgtcttc
atcatttttggtggcttcttcacgctgaatctctttgtcggggtcataattgacaacttc
aatcaacagaaaaaaaagataaggggccaggatatcttcatgacggaggagcagaagaaa
tactacaatgccatgaagaagctgggctccaagaaaccccagaagcccatcccacggccc
ctgaataaataccagggcttcgtgtttgacatcgtgaccaggcaagcatttgacatcatc
atcatggttctcatctgcctcaacatgattaccatgatggtggagaccgatgatcagagc
gaggagaagacgaaggtcctgggcaaaatcaaccagttctttgtggccgtcttcacggga
gaatgtgtgatgaagatgttcgccctgcggcagtactacttcaccaacggctggaatgtg
tttgacttcatagtggtgatcctgtccattgggagtcaggtgttttctgcaatccttaag
tcactagaaaattacttctccccaacgctcttccgcgtcatccgtctggccaggatcggc
cgcatcctcaggctgatccgagccgctaaggggatacgcacgctgctcttcgccctcatg
atgtccctgcctgcccttttcaacatcggcctcctcctcttcctcgtcatgttcatctac
tccatcttcggcatggccagcttcgctaacgttgtggaagaggctggcattgacgacatg
ttcaacttcaagacctttggcaacagcatgctgtgcctgttccagatcaccacgtcggct
ggctgggacggcctcctcagccccatcctcaacacaggacccccctactgcgaccccaac
ctaaccaacagcaatggctccaaggggaattgcgggagcccagcggtgggcatcatcttc
ttcaccacctacatcatcatctccttcctcatcgtggtgaacatgtacatcgcggtgatt
ctggagaacttcaatgtggccacagaagagagcacagagcccctgagtgaggacgacttc
gacatgttctatgagacctgggagaagttcgatccggaggccacccagttcatcgccttt
tctgccctctctgactttgcagacacgctctctggccctcttagaatcccaaaacccaat
cagaatatattaatccagatggacctgccgttggtccccggagataaaatccactgtttg
gacatcctttttgccttcacaaagaatgtcttgggagaatctggggagttggattctctg
aagactaatatggaagagaagtttatggcaactaatctttccaaagcatcctacgaacca
atagcaaccaccctccgatggaagcaagaagacatctcagccaccgtcattcaaaaggcc
tatcggagctacatgttgcaacgctccttgacactctctaaccccctgagtgtgtccagg
gctgagcaggatggtgagtcaccccccggggaaggctatgttacattcatggcaaatggc
aacagtaggctcccagacaaatcggaaactgcttctgctacatctttcccaccatcctat
gacagcgtcaccaggggcctgagtgacagggtcaacgttagcacatctagctcaatgcaa
aatgaagatgaagtcaccgctaaggaagggagcagccccggacctcagtga
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integrated database retrieval system
