Mastomys coucha (southern multimammate mouse): 116073721
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Entry
116073721 CDS
T07224
Name
(RefSeq) sodium channel protein type 11 subunit alpha-like
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116073721
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116073721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
PKD_channel
GPHH
GPR15L
Motif
Other DBs
NCBI-GeneID:
116073721
NCBI-ProteinID:
XP_031201605
LinkDB
All DBs
Position
Unknown
AA seq
1378 aa
AA seq
DB search
MQVWSGTIPLLLRVPRAGPSDPEEDCFVKENNSDDFIMCGTWLGSRSCPTGSTCNKTAFN
PDYNYTNFDNFGWSFLAMFRVMTQDSWEKLYRQILQTSGIYFVFFFVVVIFLGSFYLLNL
TLAVVTMAYVEQNRNVAAETEAKERMFQETNHLLMEEMKMEEKYYPVIFPDERNFRPFTS
DSLAAIEKQIAIQKEKKKCKDKTVAELQPRPQFDLKASRTLPKLYGDIPPELIAKPLEDL
DPFYKDHKTFMVLNKKRTIYRFSAKRALFILGPFNPIRSLMIRISVHSYPFSKSSLGNLC
KPQGSISILRTSGIYFVFFFVVVIFLGSFYLLNLTLAVVTMAYEEQNKNVAAETEAKERM
FQEAQQLLREEKEYSYASEHILYLVSHLQVCVVLWGGLPVTPSCGGLKVIVGALLRSVKK
LVDVMVLTLFCLSIFALVGQQLFMGILSQKCIKDSCGPNSTSNKEEKSQEPCFPCGKNRS
KYLVWDCSPQWLCMKKVLRTIMTDPFTEPAINICIIINTVFTGIFIVEMCLKIIALDPYH
YFRHGWNIFDSFVALVSLADVLYKTVSNKNHTFLASLRVPQLLEQTKRLSQNLPVDLFDE
HVDPLHRQRALSAVSILTITMQEQEKSQEPCLPCGKNLVSKYLVWDCSPQWLCMKKVLRT
IMTDPFTELAITICIIINTVFLAMEHHNMDDSVFTGIFIVEMCLKIIALDPYHYFRHGWN
IFDSFVALVSLADVLYNRLSNKNRTFLASLRVIFEDVNLSKRPQVENLLKYSDSIFTFIF
LLEMILKWIAFGFWKYFTSAWCWLDSLIVVVSVLSLVNVPKLKSFRTLRALRPLRALSQF
EGMKVVVNALLSAIPAILNVLLVCLIFWLIFCILGVNYFSGRFGRCIEGTDINDYLDYTT
ISNRSQCEVSNYSWKVPNVNFDNVGNAYLALLQVATYKGWLDIMNAAVDSRENKCQAFVF
DLVTSQVFDVIILGLIVLNMIIMMAEYDEIFDILNITFVVIFTVECLVKVFALRQHYFTN
GWNLFDCVVVVLSIISTMVSVLEDSNISFPPTLFRIVRLARIGPILRLVRAARGIRMFLF
ALMMSLPSLFNIGLLLFLVMFIYAIFGMNWFSKVKKSSGIDDIFNFETFSGSMLCLFQIT
TSAGWDTLLNPMLDPKAHCNSSSQESCQQPWVAIVYFVSYIIISFLIVVNMYIAVIPENF
NTATEESEEPLGEDDFEIFYEIWERFDPEATQFIQYSSLSDFADALPEPLRVAKPNKFQF
LMMDLPMVMGDRLHCMDVLFAFTTRVLGNSSGLDTMKAMMEEKFMETNPFKKLYEPIVTT
TKRKEEEQCAAIIQRAYRKHMEKMIKLRLKDRSSSSLQMFCNGDLSSLDVAKVKVHYD
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctggtcgggtaccattccgctcttgctgcgtgtccctcgggcaggcccctct
gatcccgaagaggattgctttgtaaaggaaaacaatagcgatgacttcataatgtgtggc
acatggcttggcagcagatcctgtcccaccggttctacgtgcaataaaaccgcatttaac
ccagactataattatacgaattttgacaactttggctggtcttttctcgccatgttccgg
gttatgactcaagactcctgggagaagctttatcgacagatcctccagacctctgggatc
tactttgtcttcttcttcgtggtggtcatcttcctgggctctttctacttgctcaactta
accctggccgttgtcaccatggcttacgtagaacagaacagaaatgtggctgccgagacc
gaagctaaggagaggatgtttcaggaaaccaaccacctgttaatggaggagatgaagatg
gaggagaagtactacccagtgatcttcccagacgagcggaatttccgccccttcacgtct
gactctttggctgccatagagaagcagatcgccatccaaaaggagaagaagaaatgcaaa
gacaagacagtggctgagctccagcctcggcctcagtttgacctaaaggcctccaggacg
ttacccaagctttatggggacattccccctgagcttatagcgaagcccctggaagacctg
gacccattctacaaagaccataagacattcatggtgttgaacaagaagagaacaatctat
cgcttcagcgccaagcgggccttgttcattctggggccttttaatcccatcagaagctta
atgattcgcatctctgtccattcatatcctttctctaagtctagcctgggaaacctgtgc
aaaccccaggggtccatctctatcctccggacctctgggatctactttgtcttcttcttc
gtggtggtcatcttcctgggctctttctacctgctcaacttaaccctggccgtcgtcacc
atggcttacgaagaacagaacaaaaatgtagctgctgagaccgaggctaaggagaggatg
tttcaggaagcccagcagctgttaagggaggagaaggagtacagctatgcctcagaacac
atcctgtaccttgtcagtcacctacaagtctgtgtcgttctctggggtgggcttcctgtg
acccccagctgtggaggtctgaaggtcatcgtaggcgccctgctgcgctccgtgaagaaa
ctggtagatgtgatggtcctcactctcttttgcctcagcatctttgccctggttggtcag
cagctcttcatgggaattctgagccagaaatgtattaaggacagctgtggccctaactct
acatccaacaaagaagaaaaatcccaggaaccctgtttcccatgtgggaaaaacaggtct
aagtacctggtatgggactgcagccctcagtggctgtgcatgaagaaggtgctgcggacc
atcatgacagatccctttactgagccggccatcaacatctgcatcatcatcaacactgtt
ttcactggaattttcatagtggaaatgtgtctcaagatcatcgcgctggacccttaccac
tacttccggcatggctggaacatctttgacagcttcgtggccctcgtgagtctcgctgac
gtgctctacaaaacagtgtctaataaaaaccacaccttcttggcttccctcagagtgcca
caactccttgagcaaacaaaacgactgtcccaaaacttgccagtggatctctttgatgag
cacgtggaccccctccataggcagagagccctgagtgccgtcagtatcttaaccatcacc
atgcaggaacaagaaaaatcccaggaaccctgtctcccatgtgggaaaaacttggtgtct
aagtacctggtatgggactgcagccctcagtggctgtgcatgaagaaggtcctgcggacc
atcatgacagatccctttactgagctggccatcaccatctgcatcatcatcaacactgtc
ttcttggccatggaacaccacaatatggatgactctgttttcactggaattttcatagtg
gaaatgtgtctcaagatcatcgcgctggacccttaccactacttccggcatggctggaac
atctttgacagcttcgtggccctcgtgagtcttgctgacgtgctctacaatagactgtct
aataaaaaccgcaccttcttggcttccctcagagtgatatttgaagatgtcaatctctcc
aagcgtccccaagttgagaacttactaaagtattccgatagcatttttacatttattttt
ctcctggaaatgattctgaagtggatagcctttggattctggaagtatttcactagtgcc
tggtgctggcttgattccctcattgtagtggtgtcagtgctcagtctcgtgaacgtgcca
aaattgaagtccttccggactctgcgagcgctgaggcctctgcgagcgctgtcccagttt
gagggaatgaaggttgttgtcaatgccctcctgagcgccatacctgccattctcaatgtc
ttgctggtctgcctcattttctggctcatattttgtatcctgggagtaaattatttttct
gggaggtttggaagatgcattgaggggacagacataaatgactatttggactataccacc
atttcaaaccgaagccaatgtgaagttagtaattactcttggaaggtcccgaacgtcaac
tttgacaatgtggggaatgcctacctggccctgctgcaagtggcaacctataagggctgg
ctggacattatgaatgcagctgtcgattccagagagaacaagtgtcaagccttcgtgttc
gacctagtcacaagccaggtctttgatgtcatcattctgggtcttattgtcctaaacatg
attatcatgatggctgaatatgatgaaatctttgatatcctcaacataaccttcgtggtc
atctttactgtagagtgtctcgtcaaagtctttgctttgaggcaacactacttcaccaat
ggctggaacttatttgattgtgtggtcgtggttctttctatcattagtaccatggtttct
gtcttggaggacagtaacatttccttcccgcccacactcttcagaattgtccgcttggct
cggattggtccaatcctcagactggttcgggcagctcgcggaatcaggatgttcctcttc
gctttgatgatgtctcttccctctctcttcaacattggtctgctgctctttctggtgatg
ttcatttatgccatctttgggatgaactggttttccaaagtgaagaagagctctgggatc
gacgacatcttcaactttgaaaccttttcgggcagcatgctctgtctcttccagataacc
acttcagccggctgggatactctcctcaaccctatgctggatcctaaagcccactgcaac
tcctcctcccaagagagctgtcagcagccttgggtagccatagtctacttcgtcagctac
atcatcatctcctttcttattgtggtcaacatgtacatagcagtgatcccagagaacttc
aatacagccacggaggagagcgaggaacccctgggtgaagacgactttgaaatattctat
gagatctgggagaggtttgaccccgaagcaacacagttcatccagtactcatcgctctct
gactttgctgacgccctgcccgagccattgcgcgtggccaagcccaataagtttcagttt
ctcatgatggacttgcctatggtgatgggtgatcgcctccattgcatggacgttctcttt
gctttcaccaccagggtacttgggaactccagcggcttggataccatgaaagccatgatg
gaggagaagttcatggagaccaatccttttaagaaattgtatgagcccatagtcaccacc
accaagagaaaggaggaggagcaatgtgccgccatcatccagagggcctaccgcaaacac
atggagaagatgatcaagttgaggctgaaagacaggtcaagttcatcgctccagatgttt
tgcaatggagacttgtctagcttggatgtggccaaggtcaaggttcactatgactga
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integrated database retrieval system
