Mastomys coucha (southern multimammate mouse): 116073778
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Entry
116073778 CDS
T07224
Symbol
Exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116073778 (Exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116073778 (Exosc7)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116073778 (Exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
116073778 (Exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116073778
NCBI-ProteinID:
XP_031201711
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MASVALSEAEKVYIVHGVQEDLRVDGRSCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD
LRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPKVRVLEDEEGAKDI
ELSDDPYDCIRLSVENVPCIVTLCKIGCRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMESSKRVGKVLHMSLQSLLHKEESLGPKRLKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtggcgctaagcgaggcagagaaggtctacatcgttcatggagtgcaggaa
gaccttcgggtggatggccgtagctgtgaggactaccgatgtgttgaagtagagactgat
gtggtgtctaacaccagtgggtctgccagagtcaagctgggtcatacagacatcttggtg
ggagtgaaagcagaaatggggacaccgaagctggagaaaccaaatgaaggctacctggag
ttctttgttgactgttcagccaatgctaccccagaatttgaaggtcgaggaggtgatgac
cttggcacagagattgctaacaccctctaccggatatttaacaacaagagcagcgtagac
ctgaggtccctctgcatcagtcctcgggagcactgttgggttctatatgtggatgtgctg
ctgctggaatgtggtgggaatctgtttgatgctatttccattgctgtaaaagctgctctc
ttcaacacaaggataccaaaggttcgtgttctggaggatgaagagggggcaaaggacatt
gagctgtctgacgatccttatgactgcatccgactgagtgtagagaatgtcccctgcatt
gtcaccctgtgcaagattggctgccggcatgtggtagatgccacacttcaagaggaggcc
tgttccctggccagcttgctggtatcagtgaccagcaagggagtcgtgacatgcatgagg
aaagtggggaaaggaagcctggatcccgagagcatcttcgagatgatggagagcagcaag
cgagtgggcaaggtgctacacatgtccttgcagagccttctgcacaaggaagaaagcctg
gggcccaagaggctgaaagtcgggttcctgggatga
DBGET
integrated database retrieval system
