Mastomys coucha (southern multimammate mouse): 116073906
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Entry
116073906 CDS
T07224
Symbol
Atg4d
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04136
Autophagy - other
mcoc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116073906 (Atg4d)
04136 Autophagy - other
116073906 (Atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116073906 (Atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116073906 (Atg4d)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116073906 (Atg4d)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
116073906 (Atg4d)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116073906 (Atg4d)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116073906 (Atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
116073906
NCBI-ProteinID:
XP_031202063
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPDCRRPRGQTRIPDPSNLGPSGSGVAALGSSGTDPAEPD
EVDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRCYHFEGEGDIQRFQRDFVSRL
WLTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWRWVEGTGLASSEIP
GPASPSRYRGPVRRGPSRWTQGTLEMEQDHWHRRIVSWFADHPQAPFGLHRLVELGRSSG
KKAGDWYGPSVVAHILRKAVESCSEVPRLVVYVSQDCTVYKADVARLVSWPDPTAEWKSV
VILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYC
QPTVDVSQANFPLESFHCTSPRKMAFAKMDPSCTVGFYAGNRKEFETLCSELMRILSSSS
VTERYPMFTVAEGHAQDHSLDALCTQLSQPTLLLPCTGRLLKAKRPSSEDFVFL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggctgcggctcagtaccgcagcgggagcccggaggacgcgcgc
cggcccgattgtcgccggccgaggggacaaacacggatcccggatcccagcaacctggga
ccttcggggtccggagtggcagctcttggctcctctgggacggaccccgccgagcctgac
gaggtggacaagttcaaagccaagttcctgacagcctggaacaacgtcaagtatggttgg
gcagttaaaagccggaccagcttcagcaagatctccagtgttcacctctgcgggcgatgc
taccatttcgaaggagagggtgacatccagcggtttcaaagggactttgtatctcgacta
tggctcacatatcgccgggacttcccacccctagctggaggcagcctgacctcagactgt
ggctggggatgtatgttacgaagtggtcagatgatgctggcccagggcctgctcctgcat
tttctgcctagagactggaggtgggtggagggcacaggactggcttcctctgaaatacca
gggccagcctctcccagtcgctaccgagggcctgttcgtcgtgggccttcacgatggacc
cagggtacactggagatggaacaggatcattggcaccggcggattgtttcctggtttgct
gatcatccccaggccccctttggtctacatcggctagtggagcttgggcggagctctggc
aagaaggcaggagactggtacgggccctctgtggtggcacacatcctcaggaaagctgtg
gagagttgctcagaggtcccccgcctggtggtgtacgtctctcaggactgtacagtgtac
aaggcagatgtggcacgcctggtgtcttggccagatcctacagcggaatggaagtctgtg
gtcatcctggtgcctgtacgactaggtggggagacccttaaccctgtgtatgtgccctgt
gtgaaggagcttctgcgttcagaactctgcctgggcattatggggggcaaaccccggcat
tcactgtacttcattggctatcaggatgactttctgctctacctggatccccactactgc
cagcccactgtggatgtcagccaggccaacttccccctggagtcctttcactgcacctcg
cctcgcaagatggcctttgccaagatggaccccagctgtaccgtggggttctatgctggg
aacaggaaggagtttgagacactctgctcggaactgatgaggatcctcagctcctcctca
gtcacggaacggtaccccatgttcacagtggctgaaggccacgctcaggaccacagcctg
gatgccctctgcacccagctttcccagcccacactgctgctaccttgcacaggacgccta
ctcaaggccaaaaggcccagctctgaggactttgtgtttttataa
DBGET
integrated database retrieval system
