Mastomys coucha (southern multimammate mouse): 116073912
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Entry
116073912 CDS
T07224
Symbol
Nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116073912 (Nphp3)
Cilium and associated proteins [BR:
mcoc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116073912 (Nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_14
TPR_17
NPHP3_N
MIT
TPR_11
14-3-3
TPR_3
TPR_6
AAA_16
DUF2225
KAP_NTPase
AAA_22
NACHT
FliD_C
AAA_19
AAA_14
TPR_CcmH_CycH
T2SSE
ARM_TT21_4th
DUF627
Motif
Other DBs
NCBI-GeneID:
116073912
NCBI-ProteinID:
XP_031202074
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MLLPDFGFSPSRPAPPGRPRPPGPASSWHTAGSQPQAVAGIMGTASSLVSPAGGEVIEDT
YGAGGGEACEIPVEVKPKARLLRSSFRRGAGAGPGSLPRAAGGGGLLGASFKSTGSSVPE
LEYAAAEFERLKKEYEIFRVSKNQELLSMGRREAKLDTENKRLRAELQALQKTYQKILRE
KEGALEAKYQAMERAVTFEHDRDRVKRQFKIFRETKENEIQDLLRAKRELESKLQRLQAQ
GIQVFDPGESDSDDNCTDVTAAGTQCEYWASRALGSEHSIGSMIQLQQSFRGPEFAHSSI
DVEGPFANINRDDWDAAMAGLLQATPLYSHSLWSHPVRCYLIYTDETQPEMELFLKDHSP
KLKRMCETMGYFFHTVYFPIDVENQYLTVRKWEIEKSSLVILFLHSTLPSFLLEDCEEAF
LRNPEGKPGFVYHRLEDGKAPSDAVQQLLDQVSNLSKTTKAKIIQHSGDPAEGVYKIYMG
VEKIIKQDILGLENTDVEVKDGGSEDSTPEEDDFGDVLWDIHDEQEQMEAFQQASSSTHE
LGFEKYYQRLDDLVVAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHFPNTLILSHFVGR
PMSTSAESSLIIKRLTLKLMQHFWAVSALTLDPAKLLEEFPHWLEKLSARHQGSIIIIID
SIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPTAWRLWPTLHLDPLSPKDAISIITA
ECNSVGMPLSREQEQMLEQHCRPATTRHALYVTLFSKMMAWAGRAGHLAGTLHQCLQCQD
TVALYRLVLHHVRESMPSDRDKEWMTQILCLINVSHNGVNESELMELYPEMSWASLTSIL
HSLHKMHLLTYSCGLLRFQHLQAWETVRLEYMEDPALVSSYRQKLINYFTSQLSQDRVTW
RSADELPWLFQQQGSKQKLHSCLLNLFVSQNLYKRGHFAELLSYWQFVGKDKGAMATEYF
ESLKQYENCEGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQRSLEIRETALDPDHPRV
AQSLHQLAGVYVQWKKFGDAEQLYKQALEISENAYGADHPHAARELEALATLYHKQNKYE
QAEHFRKKSVVIRQQATRRKGSLYGFALLRRRALQLEELTLGKDKPENARTLNELGVLYY
LQNNLETAEQFLKRSLEMRERVLGPDHPDCAQSLNNLAALCNEKKQYEKAEELYERALDI
RRRALAPDHPSLAYTVKHLAILYKKTGRVDKAVPLYELAVEIRQKSFGPKHPSVATALVN
LAVLHSQMKNHSEALPLYERALKIYEDSLGRMHPRVGETLKNLAVLSYEEGNFEKAAELY
KRAMEIKEAETSLLGGKAPSRQSSSGDTFLFKTTHSPNAFLPQGQS
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccctgattttggtttctcgccttcgcgccccgcccctcctggcaggccccgc
cctcctggccccgcctcctcctggcacactgcaggctctcagcctcaggcggtcgcgggc
atcatgggcacagcctcgtcgctggtgagccccgctggcggggaggtgatcgaggacacg
tacggggcaggcggcggcgaggcctgcgagatcccggtggaagtgaagcccaaggcccgc
ctgctgcgcagctcgttccgtaggggcgcgggagccgggcccgggtcgctgcctcgcgcg
gcggggggcggcggactgctgggcgccagcttcaagtctaccggctcgtctgtgcccgag
ctagagtatgcggcggccgagttcgagcggctcaagaaagagtacgagatcttccgggtc
agcaagaaccaggagttgctgtccatgggccgccgagaggccaaactggacaccgagaac
aagcggctgcgggcggagctgcaggcgcttcagaaaacttaccagaagatacttcgggaa
aaagagggtgcattagaagcaaaataccaagccatggagagagcagtcacattcgaacat
gacagagacagagttaaaaggcaattcaagatttttagggagaccaaagaaaatgaaatt
caagatttactgagggccaagcgagagctggagagcaaacttcagaggctgcaggctcag
gggatccaagtgttcgaccctggggagtctgactcagatgacaactgcacagatgtcact
gctgccggaacccaatgtgaatactgggccagcagggccctgggcagcgaacattccata
ggcagcatgatccagctccagcagtccttcagaggccctgagtttgcccacagctctatc
gatgtggaaggaccctttgcaaacatcaaccgagatgactgggacgctgccatggctggt
ttattacaggccacgcccttgtactcacattccctgtggagtcaccctgtcagatgttac
ctcatctatacagacgaaacccagcctgaaatggaactgttccttaaggaccactcacct
aaacttaaaagaatgtgcgagacaatgggatatttcttccacactgtttattttccaata
gatgttgaaaatcagtacctcactgtaagaaaatgggaaattgagaagagttctttagtt
attttattccttcactcaacattaccaagttttttactggaagactgtgaagaagccttt
ctgcgaaacccagaaggaaaaccaggcttcgtctaccaccgtctggaggacgggaaagcc
ccttctgacgctgtccagcagttgctggatcaagtttccaacctaagcaaaaccactaaa
gccaagatcatccaacactctggagatcctgcagagggagtgtataagatttacatgggt
gtggaaaagattattaaacaggacattcttggccttgagaacacagacgtggaggtgaag
gatgggggcagtgaggattccactccagaagaagatgattttggggatgttctgtgggac
atacacgatgagcaagagcagatggaagcctttcagcaggcttctagctccacccatgaa
ctgggattcgagaagtattaccaacgcctggatgatctggtggtggcaccagccccgatt
ccacccctcctggtttctggaggaccgggttctggaaagtccctccttttatcaaagtgg
atacaactgcagcagaagcatttccctaacacgctgatcctgtctcattttgtggggagg
ccaatgtcaaccagtgcagagtcctccttgattatcaagcggctgaccctcaagctgatg
cagcacttctgggcagtttctgcactgacactggaccctgctaagcttctggaggaattt
ccacattggctggagaagctatctgctcggcatcagggcagcatcatcatcatcatcgat
tccatagatcaagttcagcaagtggagaagcacatgaagtggctgatagaccccctgccg
gtgaatgtccgagtcattgtttctgtgaacgtggaaacctgccccaccgcgtggaggttg
tggcctacactgcatctcgatcctttaagccccaaggacgccatatcgataataaccgca
gaatgcaactccgtgggcatgccgttgagcagagagcaggagcagatgctagaacagcac
tgccgtccagctacgacccgccacgccctctacgtcacccttttcagcaaaatgatggcc
tgggccgggagagcgggccacttagctggaaccctccatcagtgcctgcagtgtcaggat
acagtggcactgtacagactcgttctccaccacgtccgggagtccatgccaagtgacagg
gataaggagtggatgacacagattctctgcctcatcaatgttagtcacaatggcgtgaat
gagtcagagctgatggagctgtatccagagatgtcctgggcctctttgacctccatcctt
cacagtttacacaaaatgcatctgctgacttacagttgtggcttgctcaggtttcaacat
ctacaggcctgggaaacagtgaggctggagtacatggaggaccccgccctcgtttcttca
tataggcaaaagctgattaactattttacctcccagctcagtcaggacagagtgacctgg
agaagcgcagatgagctcccgtggctcttccagcagcagggaagcaaacagaagctgcac
agctgcctcctcaacctcttcgtgtctcagaacctttacaaaagaggacacttcgccgag
ttgctgagttattggcagtttgtgggcaaagacaaaggtgccatggcgaccgagtacttt
gagtcactgaagcagtatgagaactgcgaaggcgaggaaaacatgctgtgcctggccgac
ctgtatgaaaccctcggccggtttctgaaggacttaggacttctcagtcaggccgtggtg
cctctgcagaggtccctagaaatccgggagactgccttagatcccgaccacccgagagta
gcccagtctctccaccagctggccggcgtgtacgtgcagtggaagaagttcggcgatgcc
gagcagctgtacaaacaggccttggagatctcggaaaacgcttacggggccgaccatccg
cacgctgctcgcgaactggaggcgctcgcgactttgtaccacaaacaaaataagtatgaa
caagctgaacattttaggaaaaaatcagttgtaattcgtcagcaagccacaaggcgaaaa
ggcagcctgtacgggtttgccctactgcgcaggcgtgctctgcagttggaagagctcacc
ttaggcaaggacaagcctgagaacgcccgcaccctcaacgagctgggcgtcctctactac
cttcaaaacaatctcgagacagcagagcagtttctgaagcgctccttggaaatgagggag
cgggttctggggccagaccatccagactgcgcacagtccctgaataacttggcagctctt
tgcaatgaaaagaagcagtacgagaaagcagaggagctgtacgaacgagccctggacatc
cggaggcgagcactggctcctgaccacccttccctggcctacacagtgaagcatcttgca
attctgtataagaaaacgggaagagttgacaaagctgtacctctgtatgaattggctgtt
gaaattcggcagaaatcctttggcccaaagcaccccagtgtagctactgccttggtgaac
ttggcagtccttcatagccaaatgaaaaatcacagtgaagccttgccactatatgaaaga
gcattaaagatttatgaagatagcttggggcggatgcatcctcgagttggagaaacttta
aaaaatttagctgtgctcagctatgaagaagggaattttgaaaaggctgctgaactatac
aaaagggcaatggaaataaaagaagcagagacatcacttttgggtggaaaagctccttca
aggcagtcatcaagtggagacacatttctctttaaaacaactcattctcctaacgccttc
cttccccaaggacaaagctaa
DBGET
integrated database retrieval system
