KEGG   Mastomys coucha (southern multimammate mouse): 116073928
Entry
116073928         CDS       T07224                                 
Symbol
Tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04260  Cardiac muscle contraction
mcoc04261  Adrenergic signaling in cardiomyocytes
mcoc04814  Motor proteins
mcoc04820  Cytoskeleton in muscle cells
mcoc05206  MicroRNAs in cancer
mcoc05410  Hypertrophic cardiomyopathy
mcoc05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    116073928 (Tpm1)
   04820 Cytoskeleton in muscle cells
    116073928 (Tpm1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    116073928 (Tpm1)
   04261 Adrenergic signaling in cardiomyocytes
    116073928 (Tpm1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    116073928 (Tpm1)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    116073928 (Tpm1)
   05414 Dilated cardiomyopathy
    116073928 (Tpm1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mcoc04812]
    116073928 (Tpm1)
   04147 Exosome [BR:mcoc04147]
    116073928 (Tpm1)
Cytoskeleton proteins [BR:mcoc04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     116073928 (Tpm1)
Exosome [BR:mcoc04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   116073928 (Tpm1)
SSDB
Motif
Pfam: Tropomyosin CLZ Laminin_II Crescentin TMF_DNA_bd ERM_helical DUF745 DUF3450 PUMA_CC Laminin_I ATG16 CENP-F_leu_zip Lebercilin NBP1 DUF16 DUF1664 AAA_13 DUF4200 Fez1 FPP
Other DBs
NCBI-GeneID: 116073928
NCBI-ProteinID: XP_031202126
LinkDB
Position
Unknown
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAE
FAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgctgaagctcgacaaagagaacgccttggat
cgagcagagcaagccgaggctgacaagaaggcggcggaagaccggagcaagcagctggaa
gatgagctggtgtcactgcaaaagaaactcaagggcactgaagatgaactggacaaatac
tccgaggctctcaaagatgcccaggagaagctggagctggcggagaaaaaggccacagat
gctgaggctgatgtagcttctctgaacagacgcatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggccacagctctgcagaagctggaggaggctgagaaggctgca
gatgagagtgagagaggcatgaaagtcattgaaagccgagcccaaaaagatgaagaaaag
atggagattcaggagatccagctgaaagaggccaagcacattgctgaagacgctgatcga
aagtatgaagaggtggcccgtaagctggtcatcatcgagagtgatttggaacgtgcagag
gagcgagctgagctctcagaaggcaaatgtgccgagcttgaagaagaattgaaaacggtg
acgaacaacttgaagtcactggaggctcaggctgagaagtattctcagaaggaagacaag
tatgaagaggagatcaaggttctctctgacaagctgaaggaggccgagactcgggctgag
tttgcagagagatccgtaaccaaattggagaaaagcattgatgacttagaagatgagctg
tatgctcagaaactgaagtacaaggccatcagcgaggagctggaccacgctctcaacgat
atgacttccatataa

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