Mastomys coucha (southern multimammate mouse): 116074538
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Entry
116074538 CDS
T07224
Symbol
Tfeb
Name
(RefSeq) transcription factor EB isoform X1
KO
K15590
transcription factor EB
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04020
Calcium signaling pathway
mcoc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116074538 (Tfeb)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116074538 (Tfeb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116074538 (Tfeb)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116074538 (Tfeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
HTH_68
Motif
Other DBs
NCBI-GeneID:
116074538
NCBI-ProteinID:
XP_031203025
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MEEHLEAPQALRRRGAGWPGEGRERRMGLRPGMKYAGCGCDSKGSGGLLQSLKDRVLASS
LEVRELRFMAQLAQWSWANPFCPDSVSPYAQWEQPYLCQTTIKDYEEDEYFMDLSPLDYR
EPEPTAAMASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQLGGPPTPAI
NTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHVSPAQG
SPKPPPAASPGVRAGHVLSTSAGNSAPNSPMAMLHISSNPEKEFDDVIDNIMRLDSVLGY
INPEMQMPNTLPLSSSHLNVYSGDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKE
RQKKDNHNLIERRRRFNINDRIKELGMLIPKANELDVRWNKGTILKASVDYIRKMQKDLQ
KSRELENHSRRLEVTNKQLWLRIQELEMQARVHGLPTTSPSGVNMAELAQQVVKQELPNE
DSPGEALMLGPEVPDPEPMPALPPQAPLPSAAQPQSPFHHLDFSHGLSFGGGGDEGPTGY
SDPLGTEHGSPFPNLSKKDLDLMLLDDSLLPLASDPLFSTMSPEASKASSRRSSFSMEEG
DVL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcatctggaggctcctcaggccctcaggaggcgtggtgcaggctggcctggg
gaggggcgggagaggaggatggggctgaggccaggtatgaaatacgcaggatgtggatgt
gacagcaaggggtcaggtggactcctgcagtcactgaaggacagagtgctcgcctctagt
ctagaagtcagggaacttaggttcatggctcagcttgctcagtggtcttgggcaaatccc
ttctgtccggactcagtttctccttatgcacaatgggagcaaccgtacttatgccagacc
acgattaaagactatgaagaggatgaatacttcatggacctgtctcccctcgactacagg
gagcccgaaccaacagctgccatggcgtcacgcattgggctgcgcatgcagctcatgcgg
gagcaggcacagcaggaggagcagcgagaacgcatgcagcagcaagccgtcatgcattac
atgcaacagcaacagcagcagcagcagcagcagctgggagggccccccaccccagccatc
aacacccctgtccacttccagtcacctccacctgtaccgggggaggtgctgaaggtgcag
tcctacctggagaaccccacctcctaccacctgcaacagtcccaacatcagaaggttcga
gagtacctatctgagacctacgggaacaagtttgctgcccacgtcagcccagcccaaggt
tccccgaaacctcccccagcagcatcccctggggtgcgggctggacacgtactgtccacc
tcggccggcaacagtgcccccaacagtcccatggccatgctgcatatcagctccaatcct
gagaaagagtttgatgatgtcatcgacaacatcatgcgcctggatagcgtgctgggctac
atcaaccctgaaatgcagatgcctaacacgctacccctgtccagcagccacctgaacgtg
tacagcggtgacccccaggtcacagcttccctggtgggtgtcaccagcagttcctgccct
gctgacctgactcagaagcgagagctaacagatgctgagagccgggccctggccaaggag
cggcagaagaaagacaatcacaacctaattgagagaagacgcagattcaacatcaatgac
cgaatcaaggagctgggaatgctgatccccaaggccaatgagctggacgtgcgctggaac
aagggcaccatcctcaaggcctctgtggattacatcaggaagatgcagaaggacctgcag
aagtcccgggagctggagaaccattctcgccgcctggaggtgaccaacaagcagctctgg
ctccgcatccaggagctggagatgcaggcacgagtgcatggcctccccaccacctcaccg
tcgggtgtgaatatggccgagctggcccaacaggtggtgaagcaagagctgcccaatgaa
gatagcccaggggaggccctgatgctggggcctgaggtccctgaccctgagccgatgccg
gctctccctccccaggctccgctgccttcagctgcccagccacagtctccgttccatcac
ctggacttcagccatggcctgagctttgggggtgggggcgatgaggggcccacaggatac
tctgatcccctggggacagagcatggctccccattccccaacttgtccaagaaggatctg
gacttaatgctcctagatgactccctgctccccctggcctctgatcccctcttttctacc
atgtctcctgaggcctccaaggccagcagccgccggagcagcttcagcatggaagagggt
gatgttctgtga
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integrated database retrieval system
