Mastomys coucha (southern multimammate mouse): 116074572
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Entry
116074572 CDS
T07224
Symbol
Exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116074572 (Exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116074572 (Exosc4)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116074572 (Exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
116074572 (Exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116074572
NCBI-ProteinID:
XP_031203095
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRSRALPDRALVNCQYSTATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQ
IDIYVQVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDSRLHEDHLEQVLEAAAQAARDVHTLLDRVVRQHVQEAS
ILLGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctggagctcctgtccgatcagggttaccggatagacggtcgccgcgcgggg
gagctgcgcaagatccaggcgcggatgggcgtgtttgcgcaggccgatggctcggcttat
atcgagcagggcaacaccaaggcactggcggtggtctacgggcctcacgagatccggggc
tcccggtctcgagcccttcctgaccgggctctagtgaactgtcagtacagcacggcaacc
ttcagcacaggcgagcgcaagcgaaggcctcatggagaccggaagtcctgtgagatgggg
ctgcagctacgccagaccttcgaggcagctatcctcacacaactgcacccacgctctcag
attgacatctacgtgcaggtgctgcaagcagacggtgggacctatgcagcatgtgtgaat
gcagccacgctagcagtgatggatgccgggatacctatgcgggactttgtatgtgcatgt
tcagcaggctttgtggatggcacagcactagcggacctcagccatgtggaggaagcagct
ggaggaccccagctagccctggccctgctgccagcctccggccagattgcactgcttgag
atggattcgaggctgcatgaagaccacttggagcaggtgctagaagctgctgcccaggca
gcccgagatgtgcacactctgctggatcgtgttgtccggcagcatgtgcaggaggcctct
atcttactgggggactga
DBGET
integrated database retrieval system
